| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2413 |
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| Symbol | |
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| ID | 4018911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2873143 |
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| End bp | 2874813 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637956440 |
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| Product | glutaminyl-tRNA synthetase |
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| Protein accession | YP_563416 |
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| Protein GI | 91793765 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000218793 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCATA TGGACAGCGA AGTACGTCCA AGTAACTTCA TTCGTAATAT CATAGACGAA
GACCTAGAAA GTGGTAAGCA CACTCAAGTC CAGACTCGTT TTCCGCCAGA GCCTAATGGT
TATTTGCATA TAGGCCATGC TAAGTCTATT TGTTTGAACT TCGGCATTGC TAAAGATTAT
CAAGGTCAAT GTAATTTACG TTTTGATGAT ACTAACCCTG AGAAAGAAGA CATAGATTAT
GTGAATTCTA TCCAGCAGGA TGTGTCTTGG CTTGGTTTCC AATGGAGTGG TGATGTTCGT
TACTCATCAA ACTATTTCGA TCAACTGCAC GCCTATGCGG TGGAGTTGAT TGAAAAAGGC
CTAGCTTACG TGTGTTTCTT AAACGGCGAA CAGACCCGTG AATATCGTGG CACGCTTAAA
GAGCCGGGCA AGAATAGTCC TTACCGTGAC ACTCCGGCCG CTGAAAACTT AGCCTTATTT
GAAAAAATGC GTAAGGGCGA GTTTAAAGAA GGTGAGTGCG CCCTGCGCGC TAAAATCGAT
ATGGCATCAC CTTTTATGTG CATGCGCGAT CCGATTATTT ATCGTATTCG CTTTGCTCAC
CATCATCAAA CTGGTGATAA GTGGTGTATT TATCCTATGT ACGACTTTAC TCATTGTATT
TCTGATGCAA TTGAAAACAT CACTCATTCA ATCTGCACCT TGGAATTCCA AGACAACCGC
AGACTCTACG ATTGGGTATT AGACAATTTA AACGACTTCC AAGCACCTAA CCGTACCCGC
CAGTACGAGT TTTCTCGTTT AAATCTTGAA TATACCTTGA TGTCTAAGCG TAAACTTAAC
GATTTAGTCA CACGTAAGTT AGTGACAGGT TGGGACGATC CACGTATGCC AACCATCGCA
GGCCTTCGCC GCCGTGGTTA TACCGCGGCC TCGATCCGTG AATTTTGTTT GCGCATAGGC
GTGACCAAGC AAGATAACTT AGTCGAAGTG GGTATGTTAG ATGCCTGTAT TCGTGAAGAA
TTAAATGAAT ATGCGCCGCG TGCTATGGCT GTACTCAGAC CGATTAAGGT CATCATTGAG
AACTACCCCA ACGCGACGCC TGAAATCATT AACGCTGCTG TACATCCAAA TAAAGAAGAC
ATGGGTACTC GTCAATTAGC CTTTGGCCGT GAACTCTTTA TTGATGCAGA AGACTTTAAA
GAAGAAGCCA ATAAGCAGTT TAAACGTTTA GTCATGGGCA AAGAAGTACG TCTTCGTAAT
GCTTATGTGA TTAAAGCCGA ACGTTGTGAT AAAGATGAGC AAGGCAATGT GACCACCATC
TACTGTACGT ATGATGCCGA CACCTTGGGC AAAAATCCTG CAGATGGTCG TAAAGTGAAA
GGCGTTATCC ATTGGGTTGA AGCCAGCACA GCTGTTGCGG CAGAGTTTCG TTTGTATGAC
AGGTTATTTA CTGAGACAAA TCCAGCCGTG TTTGAGACTG TGGATGAAGT GCTTAATCCT
AACTCATTAG TGGTGCTTCA TGGGGTTGCT GAAGCTAACC TTAAGCATGC TAAAGCTGAA
CAAGCCTATC AGTTCGAACG GGAAGGTTAC TTCTGCGCCG ACAGTAAGGA TTCAAGTTCG
GATCGTTTAG TGTTTAACTT GACTGTGCCG CTACGGGATT CTTTCGCGTA G
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| Protein sequence | MSHMDSEVRP SNFIRNIIDE DLESGKHTQV QTRFPPEPNG YLHIGHAKSI CLNFGIAKDY
QGQCNLRFDD TNPEKEDIDY VNSIQQDVSW LGFQWSGDVR YSSNYFDQLH AYAVELIEKG
LAYVCFLNGE QTREYRGTLK EPGKNSPYRD TPAAENLALF EKMRKGEFKE GECALRAKID
MASPFMCMRD PIIYRIRFAH HHQTGDKWCI YPMYDFTHCI SDAIENITHS ICTLEFQDNR
RLYDWVLDNL NDFQAPNRTR QYEFSRLNLE YTLMSKRKLN DLVTRKLVTG WDDPRMPTIA
GLRRRGYTAA SIREFCLRIG VTKQDNLVEV GMLDACIREE LNEYAPRAMA VLRPIKVIIE
NYPNATPEII NAAVHPNKED MGTRQLAFGR ELFIDAEDFK EEANKQFKRL VMGKEVRLRN
AYVIKAERCD KDEQGNVTTI YCTYDADTLG KNPADGRKVK GVIHWVEAST AVAAEFRLYD
RLFTETNPAV FETVDEVLNP NSLVVLHGVA EANLKHAKAE QAYQFEREGY FCADSKDSSS
DRLVFNLTVP LRDSFA
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