Gene Sden_2403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2403 
Symbol 
ID4018901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2857254 
End bp2858105 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content47% 
IMG OID637956430 
Producthypothetical protein 
Protein accessionYP_563406 
Protein GI91793755 
COG category[R] General function prediction only 
COG ID[COG2384] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACTTA GCCACAGACT TACCAGTTTG CAACGCATGA TCCAGCATCC TTATCGACAT 
ATTTGGGATT GCTGCTGCGA TCACGGTCTA TTAGGGGCGG CCTTGTTGAC TGAGCTACAG
ACACTTTCAC TGGCCACTGA GGCGGCTCCC CCGTCGCAAA CCTATGCACC TTTACAAACC
CATGCTTCTT TGCAAACAAG CGTGCATTTT GTCGACATTA TTCCCAGCCT AATGCAGGAA
GTCGAGGATA AACTACAGCG CTTTTTTCCT CAGAGCAAGC AAGCCTCCCG CAATAAAGAG
CCTGACTCAG ACCACGGCAT TAGCTGGCAA GTTCACTGCA TGGATGTAAG CCAACTGCCA
ATCATCACAG ATAACAGTCG TCAGTTGATT ATTATTGCCG GTGTTGGCGG CGCCTTGACC
CTCAAACTGG TTCAAGCGAT ACGCTTGGCA TACCCACAGC AAGCGTTAGA TTTTCTGCTT
TGCCCTGTGC ATCATCAATT TGAGCTAAGA CAAGGATTAA AAGCATTAAA TTTGGGCTTA
GTGGATGAGC AACTGATTGT TGAAAATCGG CGTTTCTATG AGCTGATTTA TGTGTCAAGT
CAGTCAAGCA CTGAGCTTTC GGCCCAAGGT GACAAACTTT GGCAACAAGA CATCAACATA
TCCCAAGCAT ACCTTAACCG CACCTTAACC CATTACCGCA ACATGCTGCG CCATAGTGCA
GCTTTAGATG GCAGGGGACA TGAATTTACC CAACAAATGT GTACGGGCTC TGTGACTTTG
CAAAGCCACA GCCAAGCAGC ACTGAATGCT ATCATAGAGT CATACAGCCA AATTAAAGTG
AAATTAGGGT AA
 
Protein sequence
MKLSHRLTSL QRMIQHPYRH IWDCCCDHGL LGAALLTELQ TLSLATEAAP PSQTYAPLQT 
HASLQTSVHF VDIIPSLMQE VEDKLQRFFP QSKQASRNKE PDSDHGISWQ VHCMDVSQLP
IITDNSRQLI IIAGVGGALT LKLVQAIRLA YPQQALDFLL CPVHHQFELR QGLKALNLGL
VDEQLIVENR RFYELIYVSS QSSTELSAQG DKLWQQDINI SQAYLNRTLT HYRNMLRHSA
ALDGRGHEFT QQMCTGSVTL QSHSQAALNA IIESYSQIKV KLG