| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2374 |
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| Symbol | |
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| ID | 4018872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2826465 |
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| End bp | 2827994 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956401 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_563377 |
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| Protein GI | 91793726 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAAGCG CTAAATTTGT AGAAGGCAGT ATTTTTCGCC ATATTTGGGT CATGAGCTCG
ACGGCGGCTA TCGGTATTTC GGCGATTTTT TTAGTGGATT TACTGGATAT TTTCTTCCTG
AGCTTATTGG GTGAGCAAGA GCTTGCCGCC GCTGTAGGTT ATGCGGGCAC CATCTCTTTT
TTCACTACCT CCATCGGCAT AGGATTATCC ATCGCTTTGG GCGCATTAGT GTCTAAAGCC
ATTGGCGCAA AAGATGTGGC TTTGGCAAAA CGATTATTAT TGAATTGCGC CATAGTGAGC
TTTGCCATCA GTGTATTAGT GGCGCTGCTC GTGGGCTTGT TCATCCCTGA ACTCTTGGCC
TTAGTTGGTG CCAGTGGCCA CACGGCTGAG TTGGCTCAAG GCTACTTGTA CATACTTATC
CCTTCGTTAC CTTTGATTTG CCTTGCAATG GCCCTCGGCG GGGCTTTACG GGCAGTAGGG
GATGCTAAGC TCTCTATGAT GTCGACCTTA GCGGGTGGCG GCGTAAACGC GGTACTAGAC
CCTATTTTTA TTTTCCTATT CGCCATGGGC ATCGAAGGCG CAGCACTGGC TTCTGTATTG
GCGCGCTTAA CTGTGCTTAT CATTTCGGCC CACGGGGTGA TGGTTAAGCA TAAACTCACC
AGTGACATCA ACTTAACGAC ATTAAGAGCC GATTTACCGA CCATTTTTGC CATTGCTTTA
CCTGCCATGA TGACCAATGT TGCCACACCG ATAGGTAATG CTGTGGTCAC ACGGGCGATT
GCCGACTATG GTGACAGTTA CGTGGCCGGT TGGGCGGTAT TAGGGCGGTT AATCCCGGTC
ACTTTTGGCA TGGTTTTCGC GCTTTCCGGT GCCATAGGCC CCATAGTGGG TCAAAATTTT
GGGGCTCAGT CATTCGATAG GGTGCGCGAC AGCCTAACCA AGGCGATACA GTTTTGCATC
TGCTATGTGT TAGTGATGTC TCTAGTCTTG TTCTTAATTA AGGACTTCAT TATTAGTGCA
TTCGATATGC AAGGCGATGG TGCGGCATTG ATCCTTTTCT ATTGCCAATA CATGGCGATA
TTTTTTATCT TTGCCGGCAT TTTATTTGTC GCCAATGCCT CGTTTAATAA TCTGGGCAAA
GCCAAGTATT CCACGCTATT TAATGTGGGC AAAGCCACCT TAGGCACCAT ACCTTTTGTG
TACTTCGGTG CTCAATACGG CGGGGTGTTC GGTGTACTGA TAGGCCAGGC GATAGGATCC
GTGTTGTTTG GGATTGTCGG CCTGTGGGTG GCTTACAAGT TAGTTGATAA TATTGAAAAA
AATACCACAA TCAACGACGC TTCATTAAGT TTAACTCAGC GAGCTGCGCT TAACACTGAG
CCGGAGTTTG AGACTGCGCC AATGAGCTCG GCAGAGTTGC CGCTTTCATC ATCTTGTGCT
CAGTTAGCGC AACTTAATGA ACCTCAGTTA TGTGAGCAAA TAAGTGAAGC AGCGGATGAA
GACACAGAGA CAAGCATTAA AAAAGCCTAA
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| Protein sequence | MTSAKFVEGS IFRHIWVMSS TAAIGISAIF LVDLLDIFFL SLLGEQELAA AVGYAGTISF
FTTSIGIGLS IALGALVSKA IGAKDVALAK RLLLNCAIVS FAISVLVALL VGLFIPELLA
LVGASGHTAE LAQGYLYILI PSLPLICLAM ALGGALRAVG DAKLSMMSTL AGGGVNAVLD
PIFIFLFAMG IEGAALASVL ARLTVLIISA HGVMVKHKLT SDINLTTLRA DLPTIFAIAL
PAMMTNVATP IGNAVVTRAI ADYGDSYVAG WAVLGRLIPV TFGMVFALSG AIGPIVGQNF
GAQSFDRVRD SLTKAIQFCI CYVLVMSLVL FLIKDFIISA FDMQGDGAAL ILFYCQYMAI
FFIFAGILFV ANASFNNLGK AKYSTLFNVG KATLGTIPFV YFGAQYGGVF GVLIGQAIGS
VLFGIVGLWV AYKLVDNIEK NTTINDASLS LTQRAALNTE PEFETAPMSS AELPLSSSCA
QLAQLNEPQL CEQISEAADE DTETSIKKA
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