| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2349 |
|---|
| Symbol | |
|---|
| ID | 4018843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 2785930 |
|---|
| End bp | 2787183 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637956372 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_563352 |
|---|
| Protein GI | 91793701 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGA CACAAGCCGC TGCTTTTGAT GGATTAGCCC AGCCACGGCC GCATTTTTTA
CAGCGCCTTA TTCCCCTGGG TTTACGCCTT CGCTGGCAGA CGTGGCTGGC AAAACGCATT
CCTGCCAGTC GCCAATTTAC TTTAAGCCAC AAAAGTATTT TTATTCTGCC CAGCGCCTTT
GGTTTAGCCT GGATTGGGCT TATTTTATTG CTGTATTTAT TTGGCACTAA CTACCAAAAC
AACCTCATCA TCGGCCTGAG TCTACTACTG GCAAGCCTAT TTCAAACCTG CATCATTTAC
AGTTACAAAA ATTTGGCAGG CCTTAGATTA AGCGCCAAAA AAAATCCGCA GATCTACGCG
GGTGACACCG CAAGCTTTGC CGTGGAGCTC AGCCATCAGA GTAGCCAACT TAATATGAGT
TCCGCCGCTA ATCATGCTGT CGATGCCGGG GGGCACACAT GGTTAAAGGA TGCTAGCCGA
CATCAACAAA TTTGCCTGCG TTTTGCAGGG CAACATCATG TCAGAATTAA ACAAGTACGC
AGTGAGAAGC TCGCTTATGT CCCCTATGAT AACAGCCGCC GTGGCCGCTT AATTCCAGGT
CGAATCACAG TTGAATCATA CTTTCCCCTA GGCTTATGCC GCACTTGGTC TTATGTGGAT
TTAGATTTAC AACAAATCAT TTTTGCCAAG CCAAAACACG ATGAAATAAT CTTAAGTGCT
GCAGAGAAAG AGGCAAAAGA AGATGAGCAT GGCCAGCAAC GCGCTGGGAT CAATGAATTT
AATGAACTGA GAGCCTATGT GCCAGGAGAA TCCTTAAAAC AAGTGGCATG GAAACAATGG
GCTCAAGGTA AGGGGTTATT GACCAAAACC TTTTCTCAAC CTCAAGGCAA ACCACTTTGG
CTGCTGCTGG CACAAATCCC AGGACAAGAC TTCGAAGACA GGCTCAGTAA GCTCGCCTGG
CAAGTGGATG AACTAAGCCA GCGCCAGCAA GTTTTTGGCC TAGTGCTGGA TAACAATCAC
ACCATCAAAC AAGACACAGG TGATAAACAC AGAATCGCGT GTCAGCAAGC CATAGCCCTA
TTTCAAACAG AAAGGGGTCA AACTAAGGGG CTTCAAACAC AGGATTTTCA GCCACAAGCA
AAAAACTCAG TGCCATCGAG CTCAACATCT CACGCAAGTT TAAGCAGCGC CGCCGATACC
TTCATGAAAA AGCTGCGCAA TATTGCTAAA AAGGGCGTGA AGAATGCAGG ATAA
|
|---|
| Protein sequence | MKQTQAAAFD GLAQPRPHFL QRLIPLGLRL RWQTWLAKRI PASRQFTLSH KSIFILPSAF
GLAWIGLILL LYLFGTNYQN NLIIGLSLLL ASLFQTCIIY SYKNLAGLRL SAKKNPQIYA
GDTASFAVEL SHQSSQLNMS SAANHAVDAG GHTWLKDASR HQQICLRFAG QHHVRIKQVR
SEKLAYVPYD NSRRGRLIPG RITVESYFPL GLCRTWSYVD LDLQQIIFAK PKHDEIILSA
AEKEAKEDEH GQQRAGINEF NELRAYVPGE SLKQVAWKQW AQGKGLLTKT FSQPQGKPLW
LLLAQIPGQD FEDRLSKLAW QVDELSQRQQ VFGLVLDNNH TIKQDTGDKH RIACQQAIAL
FQTERGQTKG LQTQDFQPQA KNSVPSSSTS HASLSSAADT FMKKLRNIAK KGVKNAG
|
|---|
| |