| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2327 |
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| Symbol | |
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| ID | 4018820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2751679 |
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| End bp | 2752311 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637956349 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_563330 |
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| Protein GI | 91793679 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAA TCGTAAATTG GATGCTGGTT TCGCGTTCGC AGCTACTCAC TGATTTATTG
GAGTGCCGCT GGCCGCAAGA ATTTTTAATC AAACTCACTC ATGCAAGCCC AGGGAATTTG
GCTGACAAAC TCGACAGCCA CCTGGTGAGT GTGGTGGTAT TTGATTTAGC GACGGTGGAT
CTGCAACAAA GTTATCAGTT GCAGCGCCTT ATCGAGCGAG AATACAGCAG TATAAAAACT
GTGTTTTTGA ATTTTCCTCG ACAAATCGAC GCGAAATTTT TGATCCATCC AGCAACCAGT
GTCGGGGTGT TTTATCTAGA CTCTGGCATA AGCGAAATAA GCAGCGGTTT GAATGACATT
TTAAAAGGCC GCAGTGTGAT GCCTTTTGAA CTGCATCAGT CCATGCTTCA TGATGATACT
GAGGATGAAA CCGATAGCCT CACCATTAGG GAGCGTGAAG TGTTGCAAGC CCTGCTGTCA
GGCAGTACTA ATTTGGATAT TGCCAACCAG TTATTTGTGA GTGAAAGTAC AATCAAAACT
CACTTGTATC GTGCATTTAG GAAAATTGGG GTTTCAAGCC GTGGTCAAGC CATCGCTTGG
GCCCAGACTC ATATGCATGA AGTGAGGTGT TGA
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| Protein sequence | MFKIVNWMLV SRSQLLTDLL ECRWPQEFLI KLTHASPGNL ADKLDSHLVS VVVFDLATVD
LQQSYQLQRL IEREYSSIKT VFLNFPRQID AKFLIHPATS VGVFYLDSGI SEISSGLNDI
LKGRSVMPFE LHQSMLHDDT EDETDSLTIR EREVLQALLS GSTNLDIANQ LFVSESTIKT
HLYRAFRKIG VSSRGQAIAW AQTHMHEVRC
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