| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2312 |
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| Symbol | |
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| ID | 4018804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2737680 |
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| End bp | 2738705 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637956334 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_563315 |
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| Protein GI | 91793664 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAACG ATCTATTACA AACGGCCGCA TTAAACCTGA AAAAAGCCGT CCCCTTGATG
CTCAAGTATA AAATCCCTAC CACCCCCACT AATTATGCCT TGTGGTATGC CTATGTAGGG
GAACAAAACC CGGCCTTGAA TCAAGAGCTT GATAACTTGA TACAGCAGAA TATTAGTTAT
TCTCCTGTCA GCAGCGAGTT ATTATATCGC AAGCATGTGT CCGATCCTGT CGAACTTGAT
GTACGCACTA TGCGTCAGAG CTTAGATGCC ATGGTGTGTG ATCTATCACA ATCACTAAAA
GACACCAATC AAGATACTGT GTCATTTCAG AGTCGCATCG AAAAAGATTT CAATAAACTA
AACGAGTTAG AAAGCCAAGG CTTCTCCTTA GAGCAAGTGA TTGGTGTGGT GCGAAGCATA
GTCAAGGAGT CCACCAGTAT TCGCTCTAGT GCTGTCAATT TTTCCCAGCA GTTACTTAAG
GCACAATCTG AGATAGATAC CTTAAAAGTA AAACTTGCAG AGACAGAAAA GGACATGTTG
TTCGATGCGC TCACCAATGT GCTCAATCGC CGTGCATTTG ATGAAGATAT TCGCGCTATT
GTCGCCCAAA AGACTGCTGG TAACTGCCTG GTATTGTTAG ATATTGACCA TTTTAAAGCC
TTTAATGACA ATTATGGTCA TCAACTCGGT GACATGGTAC TAAAAACCGT GGCTAAACGG
GTGCAAGAAG GTTGTCGCGA CGGGACTAAA TTGTATCGCT TTGGCGGTGA AGAATTTGCC
ATCATCATAC CTAAGAGCCA ACTTAGGGTG GCTCGTCAGT TAGCCGATGG ACTGCGCCGC
GCCATCGAAA AACTGACCCT AAAAGACAGA CGCAACGACA CTAAGATAGA CGCTATTACG
GCCTCCTTTG GTGTCAGTGA ATGGCAGCCA GGCCAAAGTG TAGCTGAGTT TATTGAAGCC
ACAGATAAGT TACTCTATCA AGCCAAACAC CTTGGCCGTA ATCGCGTAAT GCCCATGTCT
GGCTAA
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| Protein sequence | MSNDLLQTAA LNLKKAVPLM LKYKIPTTPT NYALWYAYVG EQNPALNQEL DNLIQQNISY
SPVSSELLYR KHVSDPVELD VRTMRQSLDA MVCDLSQSLK DTNQDTVSFQ SRIEKDFNKL
NELESQGFSL EQVIGVVRSI VKESTSIRSS AVNFSQQLLK AQSEIDTLKV KLAETEKDML
FDALTNVLNR RAFDEDIRAI VAQKTAGNCL VLLDIDHFKA FNDNYGHQLG DMVLKTVAKR
VQEGCRDGTK LYRFGGEEFA IIIPKSQLRV ARQLADGLRR AIEKLTLKDR RNDTKIDAIT
ASFGVSEWQP GQSVAEFIEA TDKLLYQAKH LGRNRVMPMS G
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