Gene Sden_2304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2304 
Symbol 
ID4018796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2730463 
End bp2731368 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content46% 
IMG OID637956326 
Productbifunctional methionine sulfoxide reductase B/A protein 
Protein accessionYP_563307 
Protein GI91793656 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAC TGACAGAGTT TGAACAATAC GTGATAGAGC AAAAAGGCAC TGAGCGGCCG 
TTTAGTGGTG AATATGTTAA TCACAATGCT AAAGGCGTGT ATTTATGCAA AAAATGCCTT
GCTCCCTTAT ACAAGAGTGA ACATAAATTT AATGCCCATT GCGGTTGGCC CGCCTTTGAT
GATGAATTGC CAGGCGCCGT TAACCGCCAT GTGGATGCCG ATGGTCGCCG GGTTGAAATC
ACCTGTGCCC AGTGTGATGG ACATCTTGGC CATGTGTTTG AAGGAGAGCA GTTAACGGCG
AATAATATTC GTCACTGCGT TAATTCTGTC TCCATGGTGT TTCAGCCAAT TGACGACACA
AATGCCGTAT CAAATACTGA GCTCGCGACC TTTGGTGCCG GATGCTTTTG GTGTGTCGAG
GCAATATTTG CCGCCCTTAA GGGGGTTGTC GAGGTCAAAT CTGGTTACAG CGGCGGTGAT
GCTCATGATG CAAATTATGA TGCTGTGTGC CAAGGGACGA CGAGTCATGC TGAAGTGGTG
CAGATAACAT ACTCTCCAGC CTTGATTGAT TTTGAAAGCC TGCTTGAAGT GCTGTTTGCC
AGTCACGATC CCACCACACT TAATCAACAG GGTAACGATA AAGGCCCTCA ATATCGCTCG
GTAATTTTTT GCCACAACAG CGCTCAGGTT GACGCCGCCA ATCAGATGAT TAGTCAATTA
ACTCAAACCC AAGTTTGGCC TAAACCCATA GTGACCCAAG TGGTTGCATT TGAGCATTTT
TATCCGGCAG AGCACTACCA TGATGACTAT TTTGCTAAAC ATGGCGAGCA GCCCTATTGC
CAAATGGTGG TGAAACCTAA ACTCGACAAA TTCAAGCAGC AATTTGCCGA TAAACTCAAA
GGCTAA
 
Protein sequence
MQKLTEFEQY VIEQKGTERP FSGEYVNHNA KGVYLCKKCL APLYKSEHKF NAHCGWPAFD 
DELPGAVNRH VDADGRRVEI TCAQCDGHLG HVFEGEQLTA NNIRHCVNSV SMVFQPIDDT
NAVSNTELAT FGAGCFWCVE AIFAALKGVV EVKSGYSGGD AHDANYDAVC QGTTSHAEVV
QITYSPALID FESLLEVLFA SHDPTTLNQQ GNDKGPQYRS VIFCHNSAQV DAANQMISQL
TQTQVWPKPI VTQVVAFEHF YPAEHYHDDY FAKHGEQPYC QMVVKPKLDK FKQQFADKLK
G