| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2284 |
|---|
| Symbol | |
|---|
| ID | 4018776 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 2708938 |
|---|
| End bp | 2709834 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637956306 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_563287 |
|---|
| Protein GI | 91793636 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.564058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTGA TAGAATGCCA ACAAGTCTCT AAGCACTACG GTGATAAATT AGCCCTAGAT
AAAGTGTCAT TGTCCTTAAG TGCAGGGGCT CCTATTGGTC TTGTTGGCCC AAATGGTGCA
GGTAAAACCA CCCTATTTAG CTTATTGTGC GGCTATATTT TACCTAGTGA AGGTGATATT
CGCATCATGG GGCACAAAGC TGGGAGCTCA GAGTTACTGG GACTTGTCTC GGCGCTGCCA
CAAGATGCGG CGTTAGATCC CAATTTAACT GTGTTAGAAC AACTGAGCTT TTTTGCACGT
TTGCAAGGCA TGCCTAAAAT GGCGGCCAAA GAAGAAGCCT TAAGAGTGCT GGCATTAGTC
GATTTAAGCA GTTCTGCCAA GCTTAAACCT AAGAGTCTGA GTCATGGTAT GGGTAAGCGG
GTCGCTATCG CTCAGGCCTT AATTGGTGAG CCTAAATTAG TCTTACTGGA TGAGCCAACG
GCAGGACTCG ACCCCGTCAA TGCAAGGCTC ATTCGCCAGA TAGTAAAATC CCAATCCATT
AACACTCAGT TTGTTATTAG CTCCCATAAC TTGGAAGAGC TTGAAAAATT GTGCGACCAA
ATTGTCTATC TAGAACAAGG AAGATTAGCG CAATCAGTCT CCTTAGCCCA ACAAGACGGC
AGTGCTTATC TTACCCTAGT GATGAAACAA GCCGACTACC CTGCACTTGT TAGCGCCATC
AAGGCCCTCC CCTCTGTGCT TGATGTGACC AATAAGGAAG AGCAACTGCT TATCAGCTAT
CAAGCGGCTG CAAATGTTGA CCTAGAGCAA GCCTTATTCT CCCTTTTCAG CACACAGGGC
TGGCAATACA AGATGCTGTT AAAAGGCAGA AGCTTGGAAG ATACCTTGTT CGCGTAA
|
|---|
| Protein sequence | MMLIECQQVS KHYGDKLALD KVSLSLSAGA PIGLVGPNGA GKTTLFSLLC GYILPSEGDI
RIMGHKAGSS ELLGLVSALP QDAALDPNLT VLEQLSFFAR LQGMPKMAAK EEALRVLALV
DLSSSAKLKP KSLSHGMGKR VAIAQALIGE PKLVLLDEPT AGLDPVNARL IRQIVKSQSI
NTQFVISSHN LEELEKLCDQ IVYLEQGRLA QSVSLAQQDG SAYLTLVMKQ ADYPALVSAI
KALPSVLDVT NKEEQLLISY QAAANVDLEQ ALFSLFSTQG WQYKMLLKGR SLEDTLFA
|
|---|
| |