Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2275 |
Symbol | |
ID | 4018767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2699715 |
End bp | 2700356 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637956297 |
Product | YceI |
Protein accession | YP_563278 |
Protein GI | 91793627 |
COG category | [S] Function unknown |
COG ID | [COG2353] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000110231 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACG CATTGAAACA TGGACGGATA CAAAGATTTA TCAACCCTTT GCTGACATTG AGTCTGTTAA CTTTCGCTGC TGTGAGCGCT GGGGTACACG CTGAAAATTG GCAGGTTAAT GCTGGTCACT CCAACATCAG CTTTGTATCT ACCAAGAAGG TCGACATCGC CGAAGTGCAC AGGTTTAAAC AGCTGCAGGG CAGCCTTAGC GAACAAGGCC AGTTGGCATT AGTGGTAGAT TTAGCCAGTG TCGATACTGG CATTAGCATT CGCGATGAAC GCATGGCAAG CCTGCTGTTT GAAGTGGCTA AGTTTCCTAA GCTTGAACTT ACAGCTCAGG TGAACCCTAA ATTAATCGAT GACTTGCCCT TAGGGGCAAC CTTAGTCACA CAAGTGGCGG TGAAAATTCA CCTTCATGGA TTAGAGCAAA CTAAGGATAT CGATGTGCTG GTGGCCAAAT TAACCCCTAG CAAGCTTGTG GTCACTAGCA TGAAACCTGT GATTGTGATG GCAGATGAAT TTAATCTCGG AGCAGGGGTT AATAAATTAC GGGATATCGC CGGCCTGAGT AGCAGTAGCA TTAGCATGTC AGTGCCAGTT TCATTTGTGC TAACCCTGTC GCAGAAAGTA TCAAATAAGT AG
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Protein sequence | MKNALKHGRI QRFINPLLTL SLLTFAAVSA GVHAENWQVN AGHSNISFVS TKKVDIAEVH RFKQLQGSLS EQGQLALVVD LASVDTGISI RDERMASLLF EVAKFPKLEL TAQVNPKLID DLPLGATLVT QVAVKIHLHG LEQTKDIDVL VAKLTPSKLV VTSMKPVIVM ADEFNLGAGV NKLRDIAGLS SSSISMSVPV SFVLTLSQKV SNK
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