Gene Sden_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2238 
Symbol 
ID4018730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2657328 
End bp2658113 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content44% 
IMG OID637956260 
Productmethyltransferase type 12 
Protein accessionYP_563241 
Protein GI91793590 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTCA GCAGTTATTT TAGCCTTAAT CAGAAGGCAT GGGATGAGAG GGCCAAAGTC 
CACTTTGACT CGCAGTTTTA TGACGTAAAT GGATTTATGC AAGGCCAGAG TTCACTCACT
GAGATAGAGT CGAGTGAATT GACTGAAATT GAAGTCAAAG GCAAAAAAAT GCTTCACCTG
CAATGCCACT TTGGCTTAGA CAGTTTGTCT TGGGCGCGCT TAGGTGCCAA GGTGACGGGC
GTTGATTTTT CAGAGCCTGC CATAAATAAG GCCCGCGAGT TAAATCATGC CTTAAACTTA
GATGCGTGTT TTATTTGTAG CGATGTCTAC AGTTTTGGTG AGCAGGCCAA AGCCGAGTTT
GATATTGTGT TTACCTCATT TGGCACTATT TGCTGGCTAC CTTGCATAGA TACTTGGGCC
GAAGTGATTG CCGATAGTTT GAAAAGTGGC GGCTGTTTTT ATATGGCTGA ATTTCATCCC
ATTCGTGATT TATTGGATGG CGAAAGCTAT TTTTATGCCC CAGCGCCCTT TGTGTGTGAT
GAAGGCACCT ATACAGAGAA TTGTGATGGC AAACAAGCCA GCATGGCGTC ATGGTCCCAC
CCATTAAGCC GAGTGATCAC CGCATTGATC AATGCCGGTA TCAAGATAGA TATGGTGAAT
GAATTTCCCT TCAGTCCCTT CGATTGTTTC GATGGTTTAG AGGAGCGAGA GCCTAAGCGA
TTTTCCCAGT TGGTTGGCGA GAACCCTTTA CCTCTGGTAT ACAGTATCAA AGGGACTAAA
AATTAA
 
Protein sequence
MSVSSYFSLN QKAWDERAKV HFDSQFYDVN GFMQGQSSLT EIESSELTEI EVKGKKMLHL 
QCHFGLDSLS WARLGAKVTG VDFSEPAINK ARELNHALNL DACFICSDVY SFGEQAKAEF
DIVFTSFGTI CWLPCIDTWA EVIADSLKSG GCFYMAEFHP IRDLLDGESY FYAPAPFVCD
EGTYTENCDG KQASMASWSH PLSRVITALI NAGIKIDMVN EFPFSPFDCF DGLEEREPKR
FSQLVGENPL PLVYSIKGTK N