Gene Sden_2204 details

Gene Information

• Locus tag: Sden_2204
• ID: 4018696
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 2616618
• End bp: 2617325
• Gene Length: 708 bp
• Protein Length: 235 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637956227
• Product: regulatory protein, TetR
• Protein accession: YP_563208
• Protein GI: 91793557
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCCAA CTCCTGAGCC TACTCCTGAT CCAATTCCTG AGCAAAAAAA CAGCCCAAAG 
AAAGCCAAGG CCGGCAGGCC AAGCCAAGAC ACTCAGTCCC GCGAACAATT AATATTGGCG 
GCCAGAAGCT TATTTGTCGA ACGGGATTAC GCCCAAGTCT CTACCCGCGA GCTTGCCAAA 
AAAGCCGGCA CAGATCCCGC TCTTATTCGC TATTACTTCG GCTCCAAAGA AGGCTTGTTT 
TCCACCATGA TCCGTGAGAC GGCTGTGCCA GTTAAGCAGC AATTATGGCA GTTGAACCGC 
AGCTTAGGGG CCGATGGCCC CGCAAATTTT ATGCTCACCT ATTATCGAGT CATGGCGGCG 
CACCCGCATT TTCCACGGCT TATCTTTAAA TTGGCCTCCT TAGATCAGTC TCAAGCTAAA 
AATCAGGAAT TAGCTCAAGC ATTCAATGAG ATAATTAATC TAGAGGATTT ACTCTTCTTT 
GACAAATTCA AATCTCAAGG CCTGTTAAGG GAGGAAGTCG ACAGCCGTTG TGCCCAGTTA 
AGTTTTTTCG CCATGATGGT GTTCCCTTTT CTTGTCCCAG ATATTTTCCT CAATAAATTG 
GGGGTTGAAA TCAGTCCTGA GTTTTTACAG CAATTGGCAA CACAAAACAG CCAATTGCTC 
GCCCATGGAC TGTTTAAGCC AGAGGTGACA TCTCATGAAC CCAAATAA 

 

Protein sequence

MKPTPEPTPD PIPEQKNSPK KAKAGRPSQD TQSREQLILA ARSLFVERDY AQVSTRELAK 
KAGTDPALIR YYFGSKEGLF STMIRETAVP VKQQLWQLNR SLGADGPANF MLTYYRVMAA 
HPHFPRLIFK LASLDQSQAK NQELAQAFNE IINLEDLLFF DKFKSQGLLR EEVDSRCAQL 
SFFAMMVFPF LVPDIFLNKL GVEISPEFLQ QLATQNSQLL AHGLFKPEVT SHEPK