| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2194 |
|---|
| Symbol | |
|---|
| ID | 4018686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 2603336 |
|---|
| End bp | 2606428 |
|---|
| Gene Length | 3093 bp |
|---|
| Protein Length | 1030 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637956217 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_563198 |
|---|
| Protein GI | 91793547 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTCA CCAAACTCGC CATAAAACGG CCTGTTACCA CCAGCATGTT CTTCCTTGCC
ATCTTACTTT TTGGGTTAGC ATCCAGCCGC ATGTTGCCCT TGGAGATGTT CCCAGGAATA
GACATACCGC AGATCATGGT GCAAGTGCCC TACCCCGGCT CATCTCCTGC CGAAGTTGAG
CGTGATATCA CCAGACCCTT AGAAGAGGCA CTGGCCACCA TGAGTGGCAT CGATGAAGTG
CATTCAAGCT CTTCTCAAGA TGGCGCTGAA ATTCAGCTTA ATATGAAATG GGAGGAGGAC
GTTGCCACCA AAAGCCTTGA GGCGCGAGAA AAAATCGACT CGGTAAGACA TTTGTTGCCA
AAAGATGTCG AGCGGGTGCT CATTCAGCAA TTCTCCACCG CCGATATGCC AGTGCTCACC
ATACGTATAT CCAGTGAACG AGAGCTGTCT AACGCCTTCG ACTTATTGGA TAAACAACTA
CGAAAGCCCC TAGAACGTGT TGATGGCGTC TCTAAAGTGA CCTTATACGG GGTCGATAAA
AAGCAAATTG AAGTCAGGCT CGATGCGCTA AAACTCAGCG CTGCCAATGT GGATACCTTG
ACCTTAACCC GGAGACTGCA AAATGAAAAC TTCGTCATTA GCGCAGGTAC CCTTAGGGCC
AATACTCATG TGTATCAAGT GTCACCTAAA GGCGAATTTA AAAGCCTTGA AGATATCAAA
AGCTTAGTTA TCAAACCCGG GCTCACCTTA GGCGATGTAG CACAAATCAA TTTCTCTTTG
CCAGAACAAG TAGAAGGCCG CTTGCTGGAC CAAAAATACG CCGTGGGCTT AGACGTATTT
AAAGAATCAG GGGCCAACTT AGTGGATGTA TCCGACCGAG TGCTTAAGGT CATTGACATC
GTCAAACAAG ATAAACAGTT TAATGGCATT AAGCTGTTCA TCATGGAAAA CCAAGCCTTC
GGGGTGAAGT CTTCATTGTC AGATTTACTT ATTTCAGGCT TGATTGGCGC CCTGCTGTCA
TTTGGCGTCT TGTACTTGTT TTTACGTAAT CTAAAGATGA CCTTAGTGGT GGTGTCTTCT
GTCCCTATTT CCATCTGCAT GACACTCGCT GTTATGTATC TATTGGGTTA TAGCCTCAAC
ATTTTATCTA TGATGGGGCT GTTATTGGCC GTAGGTATGT TGATTGATAA TGCCGTGGTC
GTCACTGAAA GTGTGCTGCA AGAAAAACAA GCAAGCAATA TTGATGATAA CGACAGTTGT
CAAATCAAAG CCAATGAACG CGCTGTGCTT ACCGGGGTTG AGAAGGTGGC ACTGGCTGTC
ATGGCCGGTA CCATGACCAC GGCAATCGTG TTTTTACCTA ATATTTTCGG GGTAAAGATT
GAAATCACCA TTTTCTTAGA GCATGTGGCC ATAGCCATTT GTATATCCTT GGCTGCATCC
TTGCTGGTAT CCAAAACCTT AATACCGCTA TTGCTAACTA AGCTGCATTT CGATACACCT
AAACAAACTA AAGAGAGTCA AATACAACTG GGCTATCAAC GCAGCCTAAA TTGGACACTT
AACCATCCTA AGATCTCGGC GGCTATTGCC CTGGTTATCT TAGTGTCTAC CGCATTGCCC
TTGACCTTTA TTAAGCAAGA TCAAAGTGAT GGAGAAGGCA ATGATCGCCT CTATATCAAT
TATCAAATTG AAGGCCGCCA CAACCTTAAA GTCACAGAGG CGACGGTAAA GCAGATGGAA
GACTACTTGT ATGCCAATAA AGAGAAATTC TTTATTGAGT CTGTCTACAG CTACTACAGC
CCGCAAGATA GCCAGTCGAC GCTTATTCTA AAAAAAGACA TTCCCATTCC CATGTCTGAG
CTCAAAAAGA GCATACGTGA GGGCTTTCCT AAGTTTTCCA TTGCCAAGCC TCAATTTGGT
TGGGGCGGTG AGCAAAGGGG AATACGCGTC ACCTTAACCG GTCGCTCGGC TTCTGAGCTC
ATTAAACTCA GTGAACAAGT GGTGCCCTTA TTAAGTAATA TTGAAGGCCT CGAGGATGTA
CGCTCTGAAG TCAGCGGCGC CCAGCAAGAA GTCGTCATTG TTATCAAGCG CCAAATGGCC
ATGCGCCTTG ACCTTAAGCT TAACGAAATT GCCTCAAACA TCGCCTTGGC GCTCAGAGGG
GTACCGCTAC GCTCTTTCAG GCATGACCCC AATGGTGAGC TTCGCATCGA ACTTGCCTTC
GATAAGAGCT GGCAAAACTC CCTAGAAGTG CTCAAACAAA TGCCCATCAT CAGGCAAGGT
GATCGCACTT ATACCTTAGA CAGTTTGGCG GATATTAAGG TCGTGCCTCG ATTTGACACT
ATTCGTCATT TTAATCGTCA AACGGCGCTC TCCATCGGTG CTAATGCAGA AGAACTGACC
ACAGAGGAAG CCCAAGAAAA AATAACGCAA GTGATGGACT CAATAAACTT CCCTTATGGC
TACGGTTACA GCTTACGCGG CGGCTTTGAA CGTCAAGATG AAGAGCAGTC TGTGATGCTT
GTGAATATGA TCTTAGCTAT CGCTATGATC TACATAGTTA TGGCGGCATT ATTCGAGTCA
TTACTGCTGC CCACAGCCAT TATTACCTCG ATCTTATTCT CCATTACTGG GGTATTTTGG
GCCTTATTAT TGACGGGGAC CCCTATGGGG ATCATGTCCA TGATAGGCAT ACTCATCTTG
ATGGGGATCG TGGTAAACAA TGGCATAGTG TTAGTGGATC AAATCAACCA GATGACCCCA
GCCCTCGATG AACTCAGTGA CACTATTGGC CGTGTGTGTG TCACACGTTT ACGCCCAGTA
CTCATGACGG TAGGCACCAC GGTATTAGGT TTAGTGCCGC TGGCTCTTGG GGATACACAA
ATTGGCGGCG GAGGTCCCCC TTACTCACCT ATGGCCATCG CCATTATCGG TGGCCTCACC
TTTTCAACCG CCACCAGTTT GTTTTTAGTG CCTTTATGCT ATCAAGCCTT ATACAGAATG
CGTTATAAAG CGGCAATTAG ACTGGGCATG GCTGACAATT TGGCGAAAAA GCTGCTACCT
TGGACAGTAG ATCCTGCCCA AAGAAAGGAA TAA
|
|---|
| Protein sequence | MNLTKLAIKR PVTTSMFFLA ILLFGLASSR MLPLEMFPGI DIPQIMVQVP YPGSSPAEVE
RDITRPLEEA LATMSGIDEV HSSSSQDGAE IQLNMKWEED VATKSLEARE KIDSVRHLLP
KDVERVLIQQ FSTADMPVLT IRISSERELS NAFDLLDKQL RKPLERVDGV SKVTLYGVDK
KQIEVRLDAL KLSAANVDTL TLTRRLQNEN FVISAGTLRA NTHVYQVSPK GEFKSLEDIK
SLVIKPGLTL GDVAQINFSL PEQVEGRLLD QKYAVGLDVF KESGANLVDV SDRVLKVIDI
VKQDKQFNGI KLFIMENQAF GVKSSLSDLL ISGLIGALLS FGVLYLFLRN LKMTLVVVSS
VPISICMTLA VMYLLGYSLN ILSMMGLLLA VGMLIDNAVV VTESVLQEKQ ASNIDDNDSC
QIKANERAVL TGVEKVALAV MAGTMTTAIV FLPNIFGVKI EITIFLEHVA IAICISLAAS
LLVSKTLIPL LLTKLHFDTP KQTKESQIQL GYQRSLNWTL NHPKISAAIA LVILVSTALP
LTFIKQDQSD GEGNDRLYIN YQIEGRHNLK VTEATVKQME DYLYANKEKF FIESVYSYYS
PQDSQSTLIL KKDIPIPMSE LKKSIREGFP KFSIAKPQFG WGGEQRGIRV TLTGRSASEL
IKLSEQVVPL LSNIEGLEDV RSEVSGAQQE VVIVIKRQMA MRLDLKLNEI ASNIALALRG
VPLRSFRHDP NGELRIELAF DKSWQNSLEV LKQMPIIRQG DRTYTLDSLA DIKVVPRFDT
IRHFNRQTAL SIGANAEELT TEEAQEKITQ VMDSINFPYG YGYSLRGGFE RQDEEQSVML
VNMILAIAMI YIVMAALFES LLLPTAIITS ILFSITGVFW ALLLTGTPMG IMSMIGILIL
MGIVVNNGIV LVDQINQMTP ALDELSDTIG RVCVTRLRPV LMTVGTTVLG LVPLALGDTQ
IGGGGPPYSP MAIAIIGGLT FSTATSLFLV PLCYQALYRM RYKAAIRLGM ADNLAKKLLP
WTVDPAQRKE
|
|---|
| |