Gene Sden_2164 details

Gene Information

• Locus tag: Sden_2164
• ID: 4018656
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 2563283
• End bp: 2563960
• Gene Length: 678 bp
• Protein Length: 225 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637956188
• Product: lysine exporter protein LysE/YggA
• Protein accession: YP_563169
• Protein GI: 91793518
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 40
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGACG CAGCCCTACT GGCGGTATTT ATCCCCACTT TTTTCTTTGT CTCCATCACC 
CCTGGCATGT GCATGACGCT CGCCATGACA TTAGGCATGA GCATAGGTGT GCGCCGCACC 
CTGTGGATGA TGTTAGGTGA ACTCACAGGC GTTGCCATAG TCGCGATTGC AGCTGTACTT 
GGGGTGGCCA GTATCATGCT CAATTACCCC CAAGTATTTG AAATCTTAAA ATACGCAGGT 
GGCGCTTATT TGGCCTATAT CGGCATCAAC ATGTGGCGCG CCAAAGGCAA GATGGCCATT 
GTTGATCCAA AGCTCGCGTC TGTAAATCAG GTAGACTCGA ACCAAATCCA AGCCAAAGCT 
CCAGTTAAAG TGTCAACTAA AGTACCAAGA GCAACCCTGA TAAGCCAAGG CTTTATCACC 
GCCATAGCAA ACCCCAAAGG CTGGGCCTTT ATGATTTCCT TGCTGCCCCC TTTTATCAGT 
GTCGATAAAG CGATCGCGCC ACAACTTGCT GTGCTACTTG GCATTATCAT GCTCACAGAA 
AGCGTCTCAA TGCTGGCCTA CGCCACAGGC GGCAAGAGCC TGCGGCTGTT TTTAACCCGA 
GGGGATAATA TTCGCTGGCT CAACCGCATA GCCGGCAGCC TAATGATAGC CGTCGGCATC 
TGGCTCGCCT TAGGGTAA 

 

Protein sequence

MPDAALLAVF IPTFFFVSIT PGMCMTLAMT LGMSIGVRRT LWMMLGELTG VAIVAIAAVL 
GVASIMLNYP QVFEILKYAG GAYLAYIGIN MWRAKGKMAI VDPKLASVNQ VDSNQIQAKA 
PVKVSTKVPR ATLISQGFIT AIANPKGWAF MISLLPPFIS VDKAIAPQLA VLLGIIMLTE 
SVSMLAYATG GKSLRLFLTR GDNIRWLNRI AGSLMIAVGI WLALG