Gene Sden_2118 details

Gene Information

• Locus tag: Sden_2118
• ID: 4018610
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 2516697
• End bp: 2517227
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637956142
• Product: hypothetical protein
• Protein accession: YP_563123
• Protein GI: 91793472

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.000230137
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAACG TCCAGGCTAA TGAGCAAGAT AATCATGCTA TTAATCAGTA TTATCAGAAG 
TTTACCTTAT CTTTTGCTAA TTTGGACTTA AGCGCCATCG ACGAGCTCTA CACTCATGAT 
GCCGTGTATA TATCTGAAAC ACACAATAGA GAAATCGTTC AAGGTAAGAG TCAAGTGATC 
GATTTATATC AATCCTTCTT TGATAAAATC CGTCGCAAGC AAGCCAAAAT AGAAGTTGAA 
TTTAGAGTTC ATGTTAGGCA ATTGCGTGAT AATGGCGCCA CCGACATAGG TTACTATCTG 
GTACGCTTTC ATCCAGCCAA AGAGACTGGC GAACCTGTCA GCGAGTTTTC CGGCAAGTTC 
GTCAATGTGT TTATCAAAGA ACAAGGGAAA TGGCGCATCA GTGTTGACTC CAACACTCGG 
GGAGATGCCA AGCTGTATTT TGCTGCTAAA CCTCAAGCTT CACTGTATTA TGGCCAAAGA 
TTCAAGGCGC CTCAGCACAA GAAGCAGCCA AAGCCAGACA AACCCCATTA A 

 

Protein sequence

MTNVQANEQD NHAINQYYQK FTLSFANLDL SAIDELYTHD AVYISETHNR EIVQGKSQVI 
DLYQSFFDKI RRKQAKIEVE FRVHVRQLRD NGATDIGYYL VRFHPAKETG EPVSEFSGKF 
VNVFIKEQGK WRISVDSNTR GDAKLYFAAK PQASLYYGQR FKAPQHKKQP KPDKPH