| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2057 |
|---|
| Symbol | |
|---|
| ID | 4018549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 2443158 |
|---|
| End bp | 2443985 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637956081 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_563062 |
|---|
| Protein GI | 91793411 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02391] conserved hypothetical protein TIGR02391 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCAGTAA AAACTTTTGA TTTAGCTACT TTAGAATCTT TGTCAAAGAT ATTAGGGAAT
ACTTCCTCAG GCCTTACCGG CACTGAAATT ACTAAATTCC TTTCAGAATC CAATATTGAA
GATCCAGGTC TTAACTCTAC TAAGTGGATG CGATTATACG ATTCACTCTC GCAAAAGCAG
CAAAATGATC GTTGTGCAAA CAATGTCGTA TCCTTCATTC AACATATAAT GCGACCTTCT
AGACATTTTG ACAATCGAGA GTGGTTTGAA AATACCAGAG CTAAATTAAA TAAGGTTTTA
TCCTTTGAGG GGCTCGAGCT TGAGGAAACC GGCAATATCA AGCAAGTTCT CAGAACAAAG
ACGATATCTG AGTCGGAAGC TAGAGCATCT AAGCTCAAGC AAAATTTGTT GTCCAGGCGT
GTTCATAAAG ACGTGCTTTA CTTTTGCAAA TCCGAATTGT TAGTAGATAA CTACTTCCAT
GCCGTATTTG AAGCCACAAA GAGTATCGCT GAGAAGATTC GCTCTAAAAC GGGGTTAACT
TCAGATGGTG CTGTTTTAGT AGACGATGCT TTTTCTTTTA ATAATAAAAT ACCTCATTTA
GCTTTGAGCT CATTGCAAAC AGAGAGTGAG AAGAGCGAGC AAAAAGGCTT TGTTAACTTA
TTAAAAGGTA TATTTGGCAC CTTTCGGAAT ACTACAGCTC ATGCACCGAA AGTCACTTGG
ATAATTGAAG AGCTAGATGC GCTGGATATA CTTTCAACTG TTTCATTAAT TCATAGGCGT
CTGGATGGTG CAATTGAAGC TCAAAAAATG TACCAAGGAA GGCCTTAA
|
|---|
| Protein sequence | MPVKTFDLAT LESLSKILGN TSSGLTGTEI TKFLSESNIE DPGLNSTKWM RLYDSLSQKQ
QNDRCANNVV SFIQHIMRPS RHFDNREWFE NTRAKLNKVL SFEGLELEET GNIKQVLRTK
TISESEARAS KLKQNLLSRR VHKDVLYFCK SELLVDNYFH AVFEATKSIA EKIRSKTGLT
SDGAVLVDDA FSFNNKIPHL ALSSLQTESE KSEQKGFVNL LKGIFGTFRN TTAHAPKVTW
IIEELDALDI LSTVSLIHRR LDGAIEAQKM YQGRP
|
|---|
| |