Gene Sden_2038 details

Gene Information

• Locus tag: Sden_2038
• ID: 4018530
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: -
• Start bp: 2417260
• End bp: 2417799
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637956062
• Product: hypothetical protein
• Protein accession: YP_563043
• Protein GI: 91793392

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000000119688
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAATAC GGTTAGCGAC AGGTGCGGAT GTGGAACAGC TTACAGGCTT GTTCGATCTT 
TATAGACAAA GTTTAGGTCA ACCATCAGAG AATCATAAGT GCCGCCAATT CGTCAGTGCA 
CGCTTAAGTG AGGGGGATAC CATGATTTTT ATCGCCCGTC ATGAGGTGCA AGCACTGGGG 
TTTATACAAC TTTATCCCTC TTACTCTTCG GTTTCACTTA AGCCTGTGTG GTATTTTGAT 
GATGCCTTTG TGGTTGAATT GTACCGCGGT ACAGGTATAG CCAAAGGATT GATAGCTAAG 
GCTAAAGAAC TTGCTGACAG TGCCGATGTC GTGCTGATAA AACGCACCTT GGTCGAGCAA 
GGCATAGCTG TTCAAGAAAA AGTTAAACAA GAAGACGTTG AGCAAGAAAC CTTAACCGGC 
AATCTGCAGC AAGCGGACGA GTCCTGTGGG GACCGCCAGG ACAATGCAAC AGAAAAATCA 
CCTGTGGGCA GCGCTTTTAA ATCAAGCTCA GTTGTGTACA TGTATCATCA GGCGCTGTAG 

 

Protein sequence

MQIRLATGAD VEQLTGLFDL YRQSLGQPSE NHKCRQFVSA RLSEGDTMIF IARHEVQALG 
FIQLYPSYSS VSLKPVWYFD DAFVVELYRG TGIAKGLIAK AKELADSADV VLIKRTLVEQ 
GIAVQEKVKQ EDVEQETLTG NLQQADESCG DRQDNATEKS PVGSAFKSSS VVYMYHQAL