Gene Sden_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2014 
Symbol 
ID4018506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2390787 
End bp2391455 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content49% 
IMG OID637956039 
Productradical activating enzyme 
Protein accessionYP_563020 
Protein GI91793369 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTATC CAGTCAACGA AGTATTCGAA ACCATTCAAG GCGAAGGCTG TTTTACTGGC 
GTGCCTGCCT TATTCGTGCG CCTGCAAGGC TGCCCTGTGG GTTGTGCTTG GTGCGATACT
AAGCAGACAT GGGATGTGCT GGCCGACAAC AAGGTGACTC CTGAGCAGGT CATTACAGTA
GATGGCACCA TAGGCCGCTG GGCCAACCAT GATGGTGCGA GTCTCATTAC CGCGTTTAAG
GCTAAAGGAT TCACCGCTAA ACATATCGTG CTAACGGGTG GTGAGCCTTG TCTTTATGAT
CTCACCGACA TCACCCATGA CTTTATTGCG GCAGGTTATA GTGTTCAAAT TGAGACCAGC
GGTACGTTCG AGGTGAAATG TCATCAAGAT GTGTGGGTGA CAGTGTCACC TAAAATCAAT
ATGAAAGGCG GCTACAAGGT GCTTGAACAA GCCCTGATCC GCGCTAATGA GATTAAGCAT
CCCATCGCCA CCCAAAATCA CATAGACGAG CTCGATGAGT TGTTAGCGGA TATTGACCTT
AGCGGTAAAA CCATTTGTCT GCAGCCAATC AGCCAGAAGG TGAGGGCCAC CGAGCTTGCG
ATGAAAACCT GTATCGCTCG CAATTGGCGC TTGTCCATCC AGACTCACAA GTACCTTAAC
ATCGATTAA
 
Protein sequence
MNYPVNEVFE TIQGEGCFTG VPALFVRLQG CPVGCAWCDT KQTWDVLADN KVTPEQVITV 
DGTIGRWANH DGASLITAFK AKGFTAKHIV LTGGEPCLYD LTDITHDFIA AGYSVQIETS
GTFEVKCHQD VWVTVSPKIN MKGGYKVLEQ ALIRANEIKH PIATQNHIDE LDELLADIDL
SGKTICLQPI SQKVRATELA MKTCIARNWR LSIQTHKYLN ID