Gene Sden_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2006 
Symbol 
ID4018495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2379385 
End bp2379801 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content47% 
IMG OID637956028 
Productregulatory protein, MarR 
Protein accessionYP_563012 
Protein GI91793361 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTTTGA AACGTAGCGA AAGTTTGACT TACCTTATTA CTCACCTTAA CCATGGGCTG 
CAAAACGAGC TCGATAGCCG CTTAAAGCGC TATCAGCTGG ATACTAAGTT GTGGCCTGTG
TTGTTTGCCC TGTGGCAAGA AGAGGGCTTG AGTCAGACTG AGCTGTCAAA ACGTTGTGAT
GTGGCCAATT ACACTATGAC AAGGCTTTTG GATCAGCTGC AAGTGCTGGG GTTTATTACC
CGCCATCAGG AAGAAGATAA CCGCCGCGCC TTTCAAATAT TCCTCACCGA TCCCGGTAAA
GCCCTAGAAA GCGATCTCAC CCTGGAAGCT GAGCGGGTGG ATGAATTGTA CCTCAGTCAA
TTGAGTCCAA TAGAGCAGCA AAACTTGATG GCACTGCTGA ACAAGATGAA TCAATAG
 
Protein sequence
MILKRSESLT YLITHLNHGL QNELDSRLKR YQLDTKLWPV LFALWQEEGL SQTELSKRCD 
VANYTMTRLL DQLQVLGFIT RHQEEDNRRA FQIFLTDPGK ALESDLTLEA ERVDELYLSQ
LSPIEQQNLM ALLNKMNQ