| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2003 |
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| Symbol | |
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| ID | 4018492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2374579 |
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| End bp | 2376171 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637956025 |
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| Product | major facilitator transporter |
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| Protein accession | YP_563009 |
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| Protein GI | 91793358 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACCA ATAATCCAAC TGCTAACACT CAGCCCCAGC TGCATTTCTG GCAAATTTTC
AATATGTGCT TCGGCTTCTT GGGCATACAA TTTGGTTTTG CACTGCAAAA TGCCAACGTC
AGCCGCATTT TTCAAACCTT GGGTGCGGAT ATGGATGCCA TCCCAATTTT GTGGATCGCA
GCGCCATTAA CTGGCCTTAT CGTTCAGCCC ATCATAGGCT ATTTAAGTGA CAACACTTGG
AACCGTTTCG GCCGCCGCAG ACCCTATTTC TTGATCGGCG CCGTACTCAC CACCCTCGCC
CTGTTTATCA TGCCTCATTC ACCCACCTTG TGGATTGCCG CTGGCATGTT GTGGATCATG
GACGCCTCAA TCAATATCGC CATGGAGCCC TTTCGTGCCT TCGTAGGTGA CAATTTACCT
AAAAGCCAGC GCACTCAAGG CTATGCCATG CAAAGCTTTT TTATCGGCAT TGGCGCAGTC
GTCGCCTCGG CGCTGCCTTA TGTCTTGACC GAATTCTTTA ATGTGGCCAA TACCGCCCCA
GCCGGTGAAA TAGCCGACTC TGTGCGCTAT GCCTTCTATT TTGGTGCTGT GGTGCTGTTT
ATGGCTGTCA CTTGGACTGT GGTTAGCACC AAAGAATATT CCCCCGCTGA GCTTGAATCC
TTCCACCAAG CCGAACAGGC TGTTAACCCA TCACTTGATA AGGTTAATCC TAGCCAAGAG
GGTGAAAGCT TTGGCCGCAG AAGCGCGGCG CAATATCAAT TTGGTGCGCT CATTTTCGCC
TTAATTGGTG GGTTATTTAC CGCCGCCGTT TATTTGTACC AGTTAGATAA GCAGTTGTAT
ATTTTGAGCA TTGGGATCTT GGCCTTTGCG CCAATGCAAT ATTACTGCGC CCTTGCCCTT
AAAAAGGCTT TCGAGGCATC AAAGAACCTA GCGACTCAGG GAAAAACCAC CTTGCCCACT
GGCATGCTGT TTACGGTTGT CGATGACATG TTTGCCATGC CAAAGGCCAT GAGGCAGCTG
GCACTGGTGC AATTCTTTGC CTGGTTTGCG CTGTTTGCCA TGTGGATCTA CACCACAGCG
GCCGTCACCT CTTATCATTA CGGCAGCTCA GATGTGCTAT CTAAGCAGTT TAACGATGGC
GCCGATTGGG TTGGTATTTT ATTCGCCTCT TACAATGGCT TTGCCGCCCT TGCTGCCATC
TGCATCCCCT TCCTCGCTAA GTGGGTCGGC GTTAGGTTGA CCCACACAGT CAATATGTTT
TTAGGCGGCA GCGGGCTGAT AAGTTTCTAC TTTATTAGCG ACCCAAGCCT GTTGTGGCTG
CCCATGATAG GAGTCGGTTT TGCCTGGGCA TCCATTTTAT CTGTGCCTTA TGCACTGCTG
TCTGGCGCGC TGCCCCCCCA AAAGATGGGC GTTTATATGG GGATATTTAA CTTCTTTATC
GTTATTCCTC AGCTGCTTGC AGCCAGCATC TTGGGCCTGT TATTGAAAAC CTTCTTCAAT
GGTGAGCCCA TCTACGCCTT AGTGCTCGGC GGGGTATTTA TGATGCTTTC CGGTATCGCA
GTGCTGTTTG TCGATCAAGA TAACTCACAC TAA
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| Protein sequence | MSTNNPTANT QPQLHFWQIF NMCFGFLGIQ FGFALQNANV SRIFQTLGAD MDAIPILWIA
APLTGLIVQP IIGYLSDNTW NRFGRRRPYF LIGAVLTTLA LFIMPHSPTL WIAAGMLWIM
DASINIAMEP FRAFVGDNLP KSQRTQGYAM QSFFIGIGAV VASALPYVLT EFFNVANTAP
AGEIADSVRY AFYFGAVVLF MAVTWTVVST KEYSPAELES FHQAEQAVNP SLDKVNPSQE
GESFGRRSAA QYQFGALIFA LIGGLFTAAV YLYQLDKQLY ILSIGILAFA PMQYYCALAL
KKAFEASKNL ATQGKTTLPT GMLFTVVDDM FAMPKAMRQL ALVQFFAWFA LFAMWIYTTA
AVTSYHYGSS DVLSKQFNDG ADWVGILFAS YNGFAALAAI CIPFLAKWVG VRLTHTVNMF
LGGSGLISFY FISDPSLLWL PMIGVGFAWA SILSVPYALL SGALPPQKMG VYMGIFNFFI
VIPQLLAASI LGLLLKTFFN GEPIYALVLG GVFMMLSGIA VLFVDQDNSH
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