Gene Sden_2002 details

Gene Information

• Locus tag: Sden_2002
• ID: 4018491
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 2372002
• End bp: 2374185
• Gene Length: 2184 bp
• Protein Length: 727 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637956024
• Product: alpha-glucosidase
• Protein accession: YP_563008
• Protein GI: 91793357

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGACTCA CGCCGCTCTC TGTACTCTCA AGCTCTATTT CCAATACTCT CAAGTCCACT 
CAAAAGCGCG CTCATCAAAT GCGCACGAAA AGAAGCACTC AAGCTCATTC TCCTTTGCGC 
CTAGCTAGCA ATATCGGCTT AATGACTGTG CTTTCAACAT TTACGGCGTT AACAGCACTC 
ACCGCTTTTA TTGCGCCAAT GGCGCAGGCG CAAACCTTGC AGTTAAGCTC CCCTGATTCT 
CATATTATGG TTTTGCTCTC TGATGATAAT AGACAGCCTC ACTATCAAGT GAGCTTCCAT 
GGCGAAACCG TGATTGACTC AAGCCGATTG GGGTTAGTGT TCAAACAGTT AGGCGAACTG 
GGGCAAGGCT TTACCCTTAA AAGCCATAAA ACCTCCAGCC ATGATAGCCA ATGGCAGCAG 
CCCTGGGGTG AGCGTGAAAC CATTTATGAT AAGCACCACG CCCTTAGCGC CATCTTTTCT 
AACGGTGCAC TCAGCTTTGA GGTCGAGTTT AAAGCCTTTG ATGATGGCAT AGGGTTTCGC 
TATCGCGTGC CTAAGCAAGC GTGTCTTAAG GGAGTTGCAC AGCTTGACAT CACCAATGAA 
CTCAGTGAAT TTAGCGTGCT TGATGCCAAA CACGCCACGG CTTGGTGGAT CCCTGGGCGC 
GGCTGGAATC GCTATGAATA CCTGTATAAC ACCACAAGCT TAGATAAGGT GGATCGCGCC 
CACACGCCGT TCACCTTCAA AACAGTCAAA GGTACTCACA TCAGTATCCA TGAAGCGGCG 
CTGATAGATT ACGCGGCTAT GGTGTTAAAC CAAGGCCGAG ACGGTAAATT AAAAGCCGAC 
TTAACCCCAT GGTCCGATGG CATTTTAGTG AAAACGGCAC CTGGGTTCAC TACCCCTTGG 
CGCACGATTC AAATTGCAGA CAGTGCCACT GGGCTGCTGA ATTCTGATCT TATCTTAAAC 
CTCAACGAGC CCAACAAGCT TGGGGATGTG TCTTGGGTTA AACCGGGCAA ATATGTCGGC 
ATTTGGTGGG GTATGCATCT AGGCGAGAAT ACCTGGGGCA GCGGTCCCAA ACACGGCGCC 
ACCAGCAGTG AAACCCAGCG CTACATGGAT TTTGCCGCTG AATACGGTTT CGATGGAGTG 
TTAGTCGAAG GCTGGAATGA AGGTTGGGAT GGCAGCTGGT ATGAAAATGG CGATGTATTT 
AGCTTCACCA AAGCCTATGA AGATTTTGAT TTGGCAAAAG TTACCGCCTA TGGCGCGGCT 
AAAAATGTAC GCTTAGTGGG CCATCATGAA ACCTCGGGCT CAGTAACCAA CTATCGCAAT 
CAAATGAGCG CCGCTTACGA TTTATATAAA AAGCATGGCG TGACTCAGGT CAAAACCGGC 
TACGTGGCCG ATGGCGCGCA AATCAAAAGA GTGGATGAGC AAGGCATAGT GCGTCACGAA 
TGGCACGATG GCCAATTTAT GGTTAACGAA TACCTGCACA GTGTCACCGA GGCGGCTAAA 
CGCGGCATCA GCATCAATAC TCATGAACCT ATTAAGGACA CTGGCCTTCG CCGCACTTAC 
CCCAACTGGA TAGCCCGTGA AGGGGCCCGC GGTCAAGAAT ACAATGCGTG GGGCACGCCG 
CCCAATAATC CTGAGCACAC GGCTATTCTG CCTTTTACAC GCATGCTGGC AGGGCCAATG 
GACTTTACCC CAGGGATTTT CAATCTGGCG CCCGAAGGCT TAGATGCGGT GAATCGGGTA 
CAGACCACCT TAACCAAGCA ATTGGCCTTG TATGTGGTGC TCTATAGCCC TATTCAGATG 
GCGGCCGATC TGCCGCGCAA TTACGTGCAG CGTTTGGATG CGTTTCAGTT TATTCGCGAT 
GTGCCAACAG ACTGGCGCCA GAGTATCGCC CTGGCGGGTG AAGTGGGTGA CTTTGTCGCG 
ATAGCCCGTC AAGCCAAAGC CAATGACGAA TGGTTTATCG GTGCGCTCAG CGATGAAAAT 
AGCCGTGAAT TACGCCTTAC GTTGGATTTC CTCGATAAAG ACCGCACCTA TCAAGCGCAA 
ATATATCGCG ATGGTCCTAA GGCCCATTGG TTAACCAATC CCTATGATTA TGTAATTGAA 
ACCAAAACCT TAACCGCGAA AGACAGCCTA ACACTAACCC TTGCGGCCAG TGGCGGTGTC 
GCTATTCGCT TACTGCCCTT ATAA 

 

Protein sequence

MGLTPLSVLS SSISNTLKST QKRAHQMRTK RSTQAHSPLR LASNIGLMTV LSTFTALTAL 
TAFIAPMAQA QTLQLSSPDS HIMVLLSDDN RQPHYQVSFH GETVIDSSRL GLVFKQLGEL 
GQGFTLKSHK TSSHDSQWQQ PWGERETIYD KHHALSAIFS NGALSFEVEF KAFDDGIGFR 
YRVPKQACLK GVAQLDITNE LSEFSVLDAK HATAWWIPGR GWNRYEYLYN TTSLDKVDRA 
HTPFTFKTVK GTHISIHEAA LIDYAAMVLN QGRDGKLKAD LTPWSDGILV KTAPGFTTPW 
RTIQIADSAT GLLNSDLILN LNEPNKLGDV SWVKPGKYVG IWWGMHLGEN TWGSGPKHGA 
TSSETQRYMD FAAEYGFDGV LVEGWNEGWD GSWYENGDVF SFTKAYEDFD LAKVTAYGAA 
KNVRLVGHHE TSGSVTNYRN QMSAAYDLYK KHGVTQVKTG YVADGAQIKR VDEQGIVRHE 
WHDGQFMVNE YLHSVTEAAK RGISINTHEP IKDTGLRRTY PNWIAREGAR GQEYNAWGTP 
PNNPEHTAIL PFTRMLAGPM DFTPGIFNLA PEGLDAVNRV QTTLTKQLAL YVVLYSPIQM 
AADLPRNYVQ RLDAFQFIRD VPTDWRQSIA LAGEVGDFVA IARQAKANDE WFIGALSDEN 
SRELRLTLDF LDKDRTYQAQ IYRDGPKAHW LTNPYDYVIE TKTLTAKDSL TLTLAASGGV 
AIRLLPL