| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1970 |
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| Symbol | |
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| ID | 4018459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2334564 |
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| End bp | 2336180 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637955992 |
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| Product | anaerobic nitric oxide reductase transcription regulator |
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| Protein accession | YP_562976 |
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| Protein GI | 91793325 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGAGC AAACGTTACT GGATATCGCT TTAGATCTTA GCCAAAGCCT GCCTAAAAAA
GCCCTCTATC AGCGCTTTAT GACAGCCGTT AACCAAGTCA TGCCCTGTGA TGCGGTAGCC
CTACTTGAAT ATCAAGGCCA TGAATTAGTG CCCGTCGCCG TGGATGGCCT GCTGCCCGAA
GTGCTGGGCA TGGGATTTTC CCCTGAGGAC CACCCTAGAT TGCAAGCCAT TATGGCTTCC
AAGCAACCTA TTCGCTTTAA CGCCGACTCT GAACTTGCCG ACCCTTATGA TGGCTACTTG
GTCATAGATC CTAAACGTGT ACTCGATGTT CATGCCTGCA TAGGTTGCAG CCTCTTTGTC
GAAGGCAGGC TCGTTGGGGT ACTCACCTTA GATGCGCTCA ATGTGGGCGC CTTCGATGCC
ATAGACGATA TTACTATCGC AACCCTAGCA GCCCTTGCCG CCGCGACCAT ACGTAACGTT
AACTTGCTCA ATCAGTTGGA CCGCCAGCAG TATAAGCTTG ATGACAATGA CAGTGTATTT
AAGCAAAAGC CGTTAAAAAA GTCTGACTTC ATCGGTGAGA CCCCCTGCAT GCAGGCCCTT
AAAGACGATA TTCGCATTGT GGCAAACTCC GAATTATCTG TGATCATTGG CGGTGAAACC
GGTGTGGGGA AGGAGCTGGT GGCTCGCAGC CTGCACGCAC AATCTAAACG CCGAGCCCAA
GCCTTAGTGC AAGTCAATTG CGCCGCCCTG CCCGATACCT TGGCAGAGAG CGAGTTATTT
GGTCACAGTA AAGGTGCCTT CACTGGCGCC GCCAAAGACA GAATGGGCAA ATTTGAGCTG
GCCCATCAAG GCACACTGTT TCTCGATGAA GTGGGTGAGT TATCCTTAGA ATTACAGGCA
AAATTATTGC GTGTCATTCA GGAAGGTGAA ATTCAGCGCA TTGGCCTTGA CCGCAACATT
CATGTGGACG TGCGCATCAT CGCCGCCTCC AATCGCAATT TACTTCAGCG AGTAAAAGAA
GGCCTATTTC GAGAAGACTT GTACCACAGG TTATGTGTCT ATCCCCTCAA TGTCCCGCCG
CTGCGAGAGC GGCAAGACGA TATCCCCTTG CTGTGCGGCA ATATACTCAC CAACCTTAAA
CATAAGATTG GCCTAAGCAG CGCCAAGACA GTGCGTTTAA CACAAGCCGC CATGCAAAAG
CTTCAGGGCT ATCCTTGGCC CGGCAACGTA CGAGAATTAC AACATGTTTT AATGCGCGCC
GCCTTGAAAG CCAGCGCCGA AGCTAAAGGC ATTACTGTCA TCCAGCTGCA TCACTTAACC
TTTGCCTGCG AGCCCATGAG CCAAGGACTC ACTGAGTTGA CCGCGTTTAA CTCAAACTCG
CCTGATTCTA ATCCATCAAC CAGTGACGAG ACGTTCGCTG CCGCAAATCG AGAAGAAAAA
GTCGAGCCGC CAGTCATTAG TCGCTCCTTC AACGATAGGG TGGCTGATTT TCAGCGCCAA
GTCATACGCC AATCACTTGA TGACAATAGC CAAGTCTGGG CCAAAGCCGC GCGGCAGTTA
CAGTTAGACC GAGGGAATTT GCATCGTCAA GCCAAACGTT TAGGGCTAAT TCCTTAA
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| Protein sequence | MLEQTLLDIA LDLSQSLPKK ALYQRFMTAV NQVMPCDAVA LLEYQGHELV PVAVDGLLPE
VLGMGFSPED HPRLQAIMAS KQPIRFNADS ELADPYDGYL VIDPKRVLDV HACIGCSLFV
EGRLVGVLTL DALNVGAFDA IDDITIATLA ALAAATIRNV NLLNQLDRQQ YKLDDNDSVF
KQKPLKKSDF IGETPCMQAL KDDIRIVANS ELSVIIGGET GVGKELVARS LHAQSKRRAQ
ALVQVNCAAL PDTLAESELF GHSKGAFTGA AKDRMGKFEL AHQGTLFLDE VGELSLELQA
KLLRVIQEGE IQRIGLDRNI HVDVRIIAAS NRNLLQRVKE GLFREDLYHR LCVYPLNVPP
LRERQDDIPL LCGNILTNLK HKIGLSSAKT VRLTQAAMQK LQGYPWPGNV RELQHVLMRA
ALKASAEAKG ITVIQLHHLT FACEPMSQGL TELTAFNSNS PDSNPSTSDE TFAAANREEK
VEPPVISRSF NDRVADFQRQ VIRQSLDDNS QVWAKAARQL QLDRGNLHRQ AKRLGLIP
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