Gene Sden_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1940 
Symbol 
ID4018429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2296647 
End bp2297429 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content53% 
IMG OID637955962 
Productenoyl-CoA hydratase 
Protein accessionYP_562946 
Protein GI91793295 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAGC AGACAAATTT AATTGAGCGT ATCGAAGGCC ACACGGCCAT TTTGACCATG 
AGTAATCCGC CGGCCAATAC GTGGACGGCC CAAAGCCTAC AAGCACTGAA AGCCAAAGTG
CTGGAGCTGA ATGCCAATAG CGAGATCTAC GCCTTAGTCT TGACCGGTGA AGGGGAGAAG
TTTTTCTCAG CCGGCGCCGA TCTAAAGTTA TTTGCCGATG GTGACAAAGG CAACGCCGCC
ACCATGGCGA AACATTTTGG TGAAGCCTTT GAAGCCTTAA GTGCGTTTCG TGGTGTCTCT
ATTGCCGCTA TCAATGGCTA TGCCATGGGC GGCGGCTTAG AAGTGGCCTT GGCTTGTGAT
ATCCGTATCG CTGAGACTCA AGCTCAAATG GCACTGCCAG AGGCGACCGT GGGATTATTG
CCATGTGCTG GCGGTACGCA AAACCTCACC GCCTTAGTGG GTGAGGGCTG GGCTAAGCGC
ATGATCTTGT GTGGTGAGCG TATCGATGCC GCAAAAGCGG AGAAAATTGG TCTAGTGGAA
GAAGTGGTTG AGCAAGGCCA GAGTCTATCG GCGGCCATCG CCTTAGCGGC CAAAGTTGCC
AAACAGAGCC CAAGCAGCGT TGCCGTGTGT AAAACCCTGA TTCAAGCGGG CCGCACTATG
CCCCGCAGCC ACGCGCTGCC ACTGGAGCGC GAGCTATTTA TCGGTTTGTT TGACACCGAA
GATCAAGGGG AAGGCGTTAA CGCTTTCTTA GAGAAACGCA GCCCACAATG GAAGAATCGC
TAA
 
Protein sequence
MTQQTNLIER IEGHTAILTM SNPPANTWTA QSLQALKAKV LELNANSEIY ALVLTGEGEK 
FFSAGADLKL FADGDKGNAA TMAKHFGEAF EALSAFRGVS IAAINGYAMG GGLEVALACD
IRIAETQAQM ALPEATVGLL PCAGGTQNLT ALVGEGWAKR MILCGERIDA AKAEKIGLVE
EVVEQGQSLS AAIALAAKVA KQSPSSVAVC KTLIQAGRTM PRSHALPLER ELFIGLFDTE
DQGEGVNAFL EKRSPQWKNR