| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1906 |
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| Symbol | |
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| ID | 4018394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2237943 |
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| End bp | 2238689 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637955927 |
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| Product | transcriptional regulatory protein-like protein |
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| Protein accession | YP_562912 |
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| Protein GI | 91793261 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00141074 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAATCT TAATGAAAAT GGTTATCGTT TATGTGGTTT GTAATATGGA TAAAATACTA
CTCATTGTTG AAGAATTGAA CACGGCGCAG TTTTTTATAG CTGGCCTGTC TGAACAAGGC
TTCGAGGTTA TATGGGCCAA GAGTGCAAAG GATGGCATAG CAGCAATGAC GCAATGCGAG
TTTGTGGCAG TGCTGTTTGA TCTACACTTG CTGCAAGATA AGAACAAAGC CGATAGTCAT
GAGTTTTGGC GTAGTCAATT ACAAGATCCT CAGCGTGCCG TTGCCGCATT GGCATACTCT
AATAGTGACC AAGAACGCTT AGAGGCATTA GAGTTAGGGG CAGATATGTA TTTAAAACGC
CCATTTATCA TCAAAGAGTT ATTGCTTAAC ATAGATGCAA TACATCGAAG GGCAGAGCGT
GTCGATAAGG CTAGGCAATC AATATCAAGC ACAATTAGCT TCGACGAACT TCACTATACG
ATTAATACAC AGCAACAAAC TCTGGTGTTA ACACAAACTG AATTTTGGCT GTTTAAGTAT
TTATTTGAAC GCGGTGGTGA GGTTGTCACT AAAGAAGAGT TGCAACGTAA GGTACTGAAC
AAACCTTTGG GGCGTTTTGA TCGAAATTTG GACATGCACG TCAGTAATAC CCGCCGTAAA
CTAACTCAAT TAAGCCTACC CAGAGAGTGG ATAAACACTG TCAGAGGGCA AGGTTATAGC
TTCAACCCTG TGATTAATGA GCCATAG
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| Protein sequence | MVILMKMVIV YVVCNMDKIL LIVEELNTAQ FFIAGLSEQG FEVIWAKSAK DGIAAMTQCE
FVAVLFDLHL LQDKNKADSH EFWRSQLQDP QRAVAALAYS NSDQERLEAL ELGADMYLKR
PFIIKELLLN IDAIHRRAER VDKARQSISS TISFDELHYT INTQQQTLVL TQTEFWLFKY
LFERGGEVVT KEELQRKVLN KPLGRFDRNL DMHVSNTRRK LTQLSLPREW INTVRGQGYS
FNPVINEP
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