Gene Sden_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1859 
Symbol 
ID4018342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand- 
Start bp2186123 
End bp2186806 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content47% 
IMG OID637955875 
Producthypothetical protein 
Protein accessionYP_562865 
Protein GI91793214 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.940668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAACG GGGTTGAAAC TTGTCCGCCA GATGGCCAAA AATGCTACCG CTTAGTGCCG 
AGTCACTTCC CACCCATTAA TTTATTTGAA GAAGTCGCAG ATCCCAATGA CTTAGCACTC 
GTCTTTGCCA TTGAAGCGCT CACCAACGAC AGGTTGCGTG ATGAGGTAGG AGATTTGGCA 
TTGGTGCCAT TGGAAGAGCG TATTTCAGGG GACGGCACTT CTCCTGTGAT GGCGGCCTTC 
ACACACATAG GCACACCAAG CCGCTTTACT GATGGCACAG AATTTGGCAT CTATTATGCG 
GCAAAAAGCT TAAATACAGC CTTTTGTGAA ACCATTTATC ACAGAGAGCA ATTTTTACTG 
GCCACCAATG AGCCTGATAC CGAGCTCACC ATGCGCTGTT ACATTAATCA GGTTGCACTG 
CCGCTACATG ATATACGGGG GTCAGACTTT CACCACTTAC AGGGTGAAGA TTATAGCGCG 
TCACAGCAAT TTGCGAAAAG TATGAGGGAG GCTGGCAGTC ATGGTCTGGC ATATTTAAGC 
GTGCGAGATG CGGGGGGCGA ATGCATAGCA GCCTTTAAAC CCAAGGCTGT CACCATTCCA 
GTTCAAGGGG GTCATTACAA GTACATCTGG AATGGTAAAA AACAGAAAAT TGAACATATT 
TTACAAGTGA ATTTGATCAA GTGA
 
Protein sequence
MHNGVETCPP DGQKCYRLVP SHFPPINLFE EVADPNDLAL VFAIEALTND RLRDEVGDLA 
LVPLEERISG DGTSPVMAAF THIGTPSRFT DGTEFGIYYA AKSLNTAFCE TIYHREQFLL 
ATNEPDTELT MRCYINQVAL PLHDIRGSDF HHLQGEDYSA SQQFAKSMRE AGSHGLAYLS 
VRDAGGECIA AFKPKAVTIP VQGGHYKYIW NGKKQKIEHI LQVNLIK