| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1855 |
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| Symbol | |
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| ID | 4018338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2181138 |
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| End bp | 2182460 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955872 |
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| Product | phage integrase |
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| Protein accession | YP_562862 |
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| Protein GI | 91793211 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGACAG CTTCCCAACC CCAATATCCT CCGGTTATTC CACTATTTGA TGCCCCTGAG
TTTATCATTC AAGGTAATCC TGTTGTTAAT CAGTATATTA CTCGAATAAG CCTAAATTCA
GTCAGCGATG CAGGTCTCGT AGTTGAGCAC GCCGCCGACT GGCTATTTGA GCAAAAAGCC
AGTGAAAACA ACTATAAAGC TTATCGCAGT GAGCTCACGA CATTCTTACA TTGGTGTTTC
GATGTGGCGT GTTTATCTGC GGCGAATGTC AGCCGAAAAG ACATGAGCCG CTACGTGGAT
TACTGCCAAA ACCCACCAAT AAGCTTAATC GGCTATTTTA ATGTGCCGCA GTTTTGTGCG
CCCAAATCCA CAAACGCGAG TGGCAGTGAT GAACGTTTTC CCAATCCTAA GTGGCGACCC
TTTGTGGGCA AGAAACACTT AGGGGAATGT CAGCCGTATC GCTTAAGTGA CAACGCATTG
AAAACAAAAC TGGCGATTTT GTCATCCTTC TATGGTTATT TAATCAGTGA AGAATACAAC
GAGCGCAATC CGGCCCAGTT ATGGCTTAAT CACAGTCGCT TTGCCATAGC CCGCAAATTC
ACCATTAATG AAGATGACAA TAACCAAGCC TTCACTGAGC TGCAGTGGTC CTACGTGATT
AGTACGGCCA AACGCTTAGC AGAAAAGGAT CCGCAAACAC ACCGGCGCAG TCTGTTTTTA
CTCTACTTAT TGTACGGCTG TTACTTACGT ATTTCCGAGG TTAGCGCCCG TGCTGGCTAT
TCACCGGTCA TGAGCCAGTT TAAGCAGGAC AGGCAAACCG GTATTTGGTA CTTTCATGTG
CCTATCTCTA AAAGCGGCAA ACCCCGCAAT ATCGCCATAT CAAAAGCCTT GCTGGCAGCC
TTGATTGAAT ATCGACGTTT TTTAGGGTTA ACGGATTATC CCAGCGCCGA TGAAAATCAT
CCGATATTTA TCCGGCACCG CGCCGCAGGC CATGGACGCG ACACAGGTAT AGTCAATGCC
AATCTTGGCA TCCGTCAAAT CCGTGATCAG ATAGACACGC TCATTCAACT GGCGGCGCAA
ACCGCCTTAG ATCATGGTCT AGAACATGAT GCCAGTGCCA TGAGAAAAAT GACTGCCCAT
AATATTCGTC ATACCGGTAT CACCCACGAC ATCAACTTGA ACCGCAGACC TTTGTCACAC
GTACAAGCCG ACGCAGGCCA TGAAAGCATA GACACCACAT CCCAATATTT ACACACCAAC
CAAACCGAAC GGCACCAGAG TGCCTTTGAA AAGCCCTTGG ATCACTTAGC TGACATTGAC
TAG
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| Protein sequence | MTTASQPQYP PVIPLFDAPE FIIQGNPVVN QYITRISLNS VSDAGLVVEH AADWLFEQKA
SENNYKAYRS ELTTFLHWCF DVACLSAANV SRKDMSRYVD YCQNPPISLI GYFNVPQFCA
PKSTNASGSD ERFPNPKWRP FVGKKHLGEC QPYRLSDNAL KTKLAILSSF YGYLISEEYN
ERNPAQLWLN HSRFAIARKF TINEDDNNQA FTELQWSYVI STAKRLAEKD PQTHRRSLFL
LYLLYGCYLR ISEVSARAGY SPVMSQFKQD RQTGIWYFHV PISKSGKPRN IAISKALLAA
LIEYRRFLGL TDYPSADENH PIFIRHRAAG HGRDTGIVNA NLGIRQIRDQ IDTLIQLAAQ
TALDHGLEHD ASAMRKMTAH NIRHTGITHD INLNRRPLSH VQADAGHESI DTTSQYLHTN
QTERHQSAFE KPLDHLADID
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