| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1813 |
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| Symbol | |
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| ID | 4018296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2139092 |
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| End bp | 2139808 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955830 |
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| Product | peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins |
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| Protein accession | YP_562820 |
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| Protein GI | 91793169 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1876] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.877549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTAAGTA ACGACGATGC AGACAAGGTC ATAGCAAAGC CAGAGCTTTA TGGTTTGAGC
GAAACCCAAT TAGTGAACTA TGAGTCTTTT TTGATGGAAC GGCGCACCCT AGAAGCCTTC
CTCAATCTTA AGCAAGGGGC ATTATTAGCC GGGTTTGAAT TGTGCATTTG CTCAGCCTAT
CGTAACTTTG ACAGGCAACT TGCCATTTGG AATGCAAAAG CCAATGGTCA GCGCAGCCTA
CTTGATGCAA ACTCGCAGGA CATTAATCCG TTTAGCCTCA CCCCAGATGA ACTTATCGAT
GCCATCTTGT TATGGTCTGC CTTGCCTGGG GCCTCACGAC ATCATTGGGG CACAGACTTG
GATGTATTTG ATGCTAAAGC CATTACTAAG GCTGAATTAC AACTGGTAAG TCACGAATAT
CAGCTTGGCG GCCCCTGCTA TGCTCTGCAT CAGTGGCTGA TGGAGAATGG CCCCAAATAT
GGGTTTTATT TCCCCTTTCA AGCCAATTTA AGTGGCGTCA GTCCTGAGCC TTGGCATATC
AGTTATTTCC CTGTGGCTGC GACCTATTTA GCTAATTTCG ATAGCCACGC CTTGCATCAG
CTGATTGAAC AAAGTGACAT TAATCCCAAA GGCGCGTTAC TGGCGCGACT TACCAGCATA
GTCGATTCCC ATGTGCGTTT TGTCGCCCCG CAGCCAGGGT TAATCCATAA GATTTAA
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| Protein sequence | MLSNDDADKV IAKPELYGLS ETQLVNYESF LMERRTLEAF LNLKQGALLA GFELCICSAY
RNFDRQLAIW NAKANGQRSL LDANSQDINP FSLTPDELID AILLWSALPG ASRHHWGTDL
DVFDAKAITK AELQLVSHEY QLGGPCYALH QWLMENGPKY GFYFPFQANL SGVSPEPWHI
SYFPVAATYL ANFDSHALHQ LIEQSDINPK GALLARLTSI VDSHVRFVAP QPGLIHKI
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