Gene Sden_1784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1784 
Symbol 
ID4018263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2108237 
End bp2108716 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content45% 
IMG OID637955797 
Productpeptide methionine sulfoxide reductase 
Protein accessionYP_562791 
Protein GI91793140 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0781853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTAG CAACATTTGG TGCAGGTTGT TTTTGGGGTG TAGAGCATTT CTTCCGTGAA 
GTCGAGGGAG TCACTCAGGC GACTTGTGGT TACATGGGGG GGAAAGACAC AGCAGTCACC
TATAAAGAAG TAAAAACCGG CACCACAGGC CACGCCGAAG TGGTGCAAGT GGAATTCGAT
CCCGAACGTG TAAGCTTCAA TGCACTGCTT GAATTTTTTT GGAAAAATCA CAACCCGACT
ATGCTTAACA TGCAAGGGGG TGACATAGGC TCACAATACC GCAGTACTAT CTTTTTTCAT
GACAAAGAAC AAAAACAGCA GGCAGAAGCT TCTAAGCTTG CCCTAGCCCG CAGTGGCAAA
TGGGGACTTA GGCCAATAGT CACTGAAATA GTGCCCGTAC AAACCTTTCA TATCGCCGAA
GAGTATCACC AAAATTATTT AGAAAAGAAC AACCTACCTA GTTGCCATTT AACTTATTAA
 
Protein sequence
MALATFGAGC FWGVEHFFRE VEGVTQATCG YMGGKDTAVT YKEVKTGTTG HAEVVQVEFD 
PERVSFNALL EFFWKNHNPT MLNMQGGDIG SQYRSTIFFH DKEQKQQAEA SKLALARSGK
WGLRPIVTEI VPVQTFHIAE EYHQNYLEKN NLPSCHLTY