Gene Sden_1685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1685 
Symbol 
ID4018161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1965500 
End bp1966807 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content45% 
IMG OID637955696 
Producthypothetical protein 
Protein accessionYP_562692 
Protein GI91793041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACAC TAAGAAAGCT TATGCGTTTT AACAAGCTAA ACAGCTTACT ACGCGCTTTA 
TGTACAATCA CCTTAATCGT AGGACTCAGT GGTTGCCAGC TATATCAAAT GGCGAGTTTA
CGCTGGCACA ATGCCAATAC TGATGTCGTA TGGCAGGGGG AGAACAATAC CTCATCATTA
TCTTTTACCA TGATGAACAA CCATATTTTA GTGCCAGTGC GAGTCAATGG CGGCGAGCCA
ATGATGTTTG TGTTGGACTC AGGTGCCGCA GCCAGCGTGT TGACACAAAC CCGAGCGACC
AAGGCCCTGA AACTGCCTCT GAATAACCCG ATACAGATCT CAGGCACAGG CGATGGACCC
GCGCCAACCG CTTATATTGT TCATGATCAG CACATTACAT TAGGTAGTCT TTCTGTGGAG
GGCTTATCCA TGGTCTACGC GCCAGCCGAT GCCATGCCAT TTCAAAATGA AGAGGAGACC
TATTTTGATG GCGTACTGGG CGCTGATTTT TTCAATTGCT GCCTGGTTGA AATCGATCAC
GATAAACAGC AATTACATTT CCATCGGCCC ACTGGCGACA AAAAAATCCA ATATGAGAAC
CTAAATTGGC AACGATTAAC TATGGAGGTT GAAAATAATA CGCCCTACCT TAGGACAAGT
ATTGATAGTC AGTCGAGAAA AGCCCAAGTC AAAGTCATGT TAGATACGGG TTCAACAGGC
ACTCTGAGTC TAAAAGTGGG TATTAACCCA AATATTCAGT TGCCAGAGAA AACTTTTCAG
TCCCGCTCTA TCGGTATTAA GGGATATGCC ACCCAGTTGA ATGGATTATT GGATACGATT
CGTTTGGGGG ATTACAAGAT AACTGACTTT AACGCTTCGT TTAAGATGAT AAATGACGAT
CCTGAGGATG ATAGCGATGG TATTCTTGGA AACCAGATAA TGAAACGCTT CAATATGGTG
TTCGACTTCA ACAATGAAAC GCTTTGGCTG CGCCCCAGCA AGCTTTACCA GAACCCAGTG
CCAAAGAACA GCAGCGGTCT CTTGCTCCTA CCTCACACCC AAGGCGCCGT GGTGCGAGAT
ATCACGCCCA ATAATAGTTC GATCCACGCT CTGGGCATTA AAGAGAACAG CATCATCACC
CATATCCATG GCCAGGCTGT GACGGCTAAG AATTTCGATA TATTAACTGG CTTACTTCAA
TCACCAGACA CCAACCAAGT GCCCCTTTGC TGGACATGGC AAGATGAAAA CCATTGCGAT
GTGTTGCGAC TTCAAGATAG CCCCAAAACA GCGTCACACA TTCTTTAA
 
Protein sequence
MMTLRKLMRF NKLNSLLRAL CTITLIVGLS GCQLYQMASL RWHNANTDVV WQGENNTSSL 
SFTMMNNHIL VPVRVNGGEP MMFVLDSGAA ASVLTQTRAT KALKLPLNNP IQISGTGDGP
APTAYIVHDQ HITLGSLSVE GLSMVYAPAD AMPFQNEEET YFDGVLGADF FNCCLVEIDH
DKQQLHFHRP TGDKKIQYEN LNWQRLTMEV ENNTPYLRTS IDSQSRKAQV KVMLDTGSTG
TLSLKVGINP NIQLPEKTFQ SRSIGIKGYA TQLNGLLDTI RLGDYKITDF NASFKMINDD
PEDDSDGILG NQIMKRFNMV FDFNNETLWL RPSKLYQNPV PKNSSGLLLL PHTQGAVVRD
ITPNNSSIHA LGIKENSIIT HIHGQAVTAK NFDILTGLLQ SPDTNQVPLC WTWQDENHCD
VLRLQDSPKT ASHIL