| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1667 |
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| Symbol | |
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| ID | 4018143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1937579 |
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| End bp | 1938775 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637955678 |
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| Product | PrpF, AcnD-accessory |
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| Protein accession | YP_562674 |
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| Protein GI | 91793023 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.870319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTCTT CAACTCAGTT AACTTTCCCC CCCCAATTGA GAGTGCCCGC CACCTATATG
CGCGGCGGCA CCAGCAAAGG GGTATTTTTT AGCCTCAAAG ATTTACCCAT AAAAGCCCAA
GTGCCAGGGG CTTATCGTGA TGCCCTGTTA TTGCGTATTA TCGGTAGTCC AGACCCATAC
GCCAAACAAA CCGATGGCAT GGGCGGTGCG ACTTCAAGCA CCAGCAAGAC GGTAATTTTA
TCTAAAAGTG AGCAAAAAAA TCACGATGTA GATTATCTGT TTGGACAAGT GGCCATAGAC
AAAGCCTTTG TGGACTGGAG CGGTAACTGC GGCAACTTAA GTGCTGCCGT GGGGGCGTTT
GCCATCAGCA ATGGCCTAGT GGACAGCAGC CGTATTCCAC AAAATGGCAT AGCAACAGTG
CGTATTTGGC AGGCCAATAT TAACAAAACC ATCATAGCCC ATGTGCCCAT GACACAAGGT
CAAGTGCAAG AAACCGGTGA TTTTGAGCTC GATGGGGTCA CCTTTCCAGC CGCCGAAGTG
CAGCTTGAAT TTATGGCGCC AGCGGACGCT GAGGGCGCCA TGTTCCCCAC GGGCAATCTT
GTCGATGAAT TAGCTGTGCC AGGCCTTGGC AATATTAAGG TCACCTTAAT CAATGCCGGT
ATCCCCACCA TTTTTGTCGA TGCCGCCGCC ATAGGCTACA GAGGCACTGA ACTTCAAGAT
GCCATTAATA ATGATGAAAA AGCCTTAGGC TTATTTGAAA CTATACGTGC TCATGGCGCA
GTGAAAATGG GCTTAATTAA GCACATAGAT GAAGCACAAA ATCGCCAACA TACCCCTAAA
GTTGCCTTTG TGGCCGCGCC ATTGGACTAT CAGGCGTCTA GCGGGAAAAG GGTCAAAGCG
ACTGAGGTGG ATCTATTGGT GCGCGCCATG TCCATGGGTA AATTACACCA TGCCATGATG
GGCACAGCTG CGGTTGCCAT AGGCACGGCG GCGGCAATTC CCGGCACCTT AGTGAATTTG
GCCGCGGGCG GCGGTAACCG TCAAGTAGTG ACCTTCGGTC ATCCATCTGG GGTGTTAAAA
GTGGGCGCTG AGGCTGAGCT TATAGACAAC CAATGGCAAG TGACTAAAGC GATAATGAGC
CGCAGCGCGC GGGTGCTGAT GGAAGGATGG GTGAGGGTGC CAGAGCCTAT TGTCTAA
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| Protein sequence | MTSSTQLTFP PQLRVPATYM RGGTSKGVFF SLKDLPIKAQ VPGAYRDALL LRIIGSPDPY
AKQTDGMGGA TSSTSKTVIL SKSEQKNHDV DYLFGQVAID KAFVDWSGNC GNLSAAVGAF
AISNGLVDSS RIPQNGIATV RIWQANINKT IIAHVPMTQG QVQETGDFEL DGVTFPAAEV
QLEFMAPADA EGAMFPTGNL VDELAVPGLG NIKVTLINAG IPTIFVDAAA IGYRGTELQD
AINNDEKALG LFETIRAHGA VKMGLIKHID EAQNRQHTPK VAFVAAPLDY QASSGKRVKA
TEVDLLVRAM SMGKLHHAMM GTAAVAIGTA AAIPGTLVNL AAGGGNRQVV TFGHPSGVLK
VGAEAELIDN QWQVTKAIMS RSARVLMEGW VRVPEPIV
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