Gene Sden_1663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1663 
Symbol 
ID4018139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp1931845 
End bp1932501 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content48% 
IMG OID637955674 
ProductGntR-like protein 
Protein accessionYP_562670 
Protein GI91793019 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACTCC ATTCACAAGC ACCGGTCACG GCAGCGGACA AAACCTTTAT TCTTCTTCGA 
GACGATATCG TCGAAGGGCG TATTCTGGCG GGCGCTAAGC TTAGCGAGAC TGAGTTGTCG 
ACAAAATACG GTGTCAGTCG CGCCGTTATC CGTGAAGCCA TTAATCGTTT AGAGTCGTGC 
CACATCGTTG AGCGTAAAGC TAATGTGGGC GCCAGGGTCG TGGCCTTAAC CCCAGAAGGG 
TTAGCGCAAC TCTATGAAGT GCGTGAATCC TTAGAGGGCA TGGCGGCTCG TCTTGCGGCT 
AAAAACATGA CTCCAGATGA AATTAGCGAA TTAAGCGCTT TATTAACTCG CCATTTTGAT 
GAAGTCAAAG GCGGCGAGTC TTATTACCAA GAAGCGGGAG ACGTGGACTT TCATTATCGC 
ATTATCTTGG GCAGTAAGAA TAAACACCTT ATCGCACTGC TGTTTGATGG CATTTATCAC 
TTAGTGCGCA TGTACCGGGT GCAACTGGGC ATGGCGGGCC CGCGAGTCAC TACAGCATTC 
GATGAGCATA AGCATATAGT GCAGGCCATC AGTAACCGCG ATGAAGAATT AGCCGAAATT 
TTGATGCGTC GGCACATAAT GTATTCGAAA CACAATATTG AAACCAAGCT TGCATAA
 
Protein sequence
MTLHSQAPVT AADKTFILLR DDIVEGRILA GAKLSETELS TKYGVSRAVI REAINRLESC 
HIVERKANVG ARVVALTPEG LAQLYEVRES LEGMAARLAA KNMTPDEISE LSALLTRHFD 
EVKGGESYYQ EAGDVDFHYR IILGSKNKHL IALLFDGIYH LVRMYRVQLG MAGPRVTTAF 
DEHKHIVQAI SNRDEELAEI LMRRHIMYSK HNIETKLA