Gene Sden_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1590 
Symbol 
ID4018065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1850236 
End bp1850718 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content48% 
IMG OID637955600 
Productregulatory protein, MarR 
Protein accessionYP_562597 
Protein GI91792946 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.298967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGG ATAGAGTCGA GACATTTTTA CAGCAATGGC AACAAGTCAG GCCAGAGCTC 
GATTGCTCAC CTATGGGGGT GATTGGCAGG CTTGCAAGAG CACAGCAGTT GATCAGTGCC
CGTTTATTAC CCGTTTTTAA AGCATTTAAC TTAAGCGCCA TCGAGTTTGA TATCTTGGCG
ACCCTAAGAC GGGCGGACTG TCCATTAACG CCCACAGAGC TTTACCAAAC CTTGATGATT
TCTTCTGGTG CCATGAGTAC CCGCTGCGAA CAATTAGTCC AGCGGCAGTT GATTGAGCGG
CTTGCTAGTG GTGATGATAG GCGCAGCTGT AAAATTGCAC TGACCTCCAT TGGCACCACC
TTGATTGATG CCGCTGTGGA GGCGCATTTG ACTAATGAAA CTGATATTTT GTCGCCGCTG
ACCTTAGATG AACAGCAGCA GCTGGCAAGC TTATTAACAC GTTGGCTGGT AGCGAATGAA
TAA
 
Protein sequence
MKQDRVETFL QQWQQVRPEL DCSPMGVIGR LARAQQLISA RLLPVFKAFN LSAIEFDILA 
TLRRADCPLT PTELYQTLMI SSGAMSTRCE QLVQRQLIER LASGDDRRSC KIALTSIGTT
LIDAAVEAHL TNETDILSPL TLDEQQQLAS LLTRWLVANE