| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1583 |
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| Symbol | |
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| ID | 4018058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1841044 |
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| End bp | 1841805 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637955593 |
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| Product | ABC transporter periplasmic-binding protein |
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| Protein accession | YP_562590 |
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| Protein GI | 91792939 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0436102 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGGA ATGTTAATTT TATTTTGGTT TGTGCGCTAT GTTCTTCATT TTCTTACGCT
GATGTGGTCA GCATTCGTGC CGATGCATGG TATCCCATCA ATGGCGATGC TGGCAGTGAA
AAGCCCGGTT ATATGATTGA AATTGCAGAG GCTATCTTAA CTGAGAATGG TCATAGCCTA
GACTATCAAA CTATGCCTTG GGAGCGTAGC CTCACTGAGG TGAGGGCGGG CAAATATGAT
TGCGTGGTGG GCGCGACGCC AGGGGATGCA GAAGATTTTA TTTTTCCAGA AGAATCATGG
GGTGCATTTG AATCCACTTT CTATGTTAAA AAAGGCAATG GCTGGCGATA TACCGACTTA
GACAGCGTGA AAAACATTAA AGTGGGCGTC ATAGGGGGTT ATGCTTACAG TGACGAATTT
GATGCTTATG TGGCCGCCAA TAAGGCCAAT GCTATGGTTC AAGTGCTTAA TGCTAATAAT
GCGTTAGAGC AAAATATTAA AAAGCTCAAT GCTGGTCGTA TCGATGCCGT TGTAGAGTCC
CATTTAGTGA TGAACGCCAA ATTAATGGAA ATGGGCTTGG TTGATAACAT CACATCGGCA
GGAGCACTTA CCGAAAGTGA GCCCATCTTC ATCGCTTGCT CCCCCGCTAA AGCCAGTTCC
AAAATCTATA GTTCATTATT TTCAGGCGGA ATACAAAAGT TGCGCGCATC AGGTCAGTTG
AAAACGATTC TTGACAAATA CGGTTTAACC GATTGGAAAT AG
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| Protein sequence | MNRNVNFILV CALCSSFSYA DVVSIRADAW YPINGDAGSE KPGYMIEIAE AILTENGHSL
DYQTMPWERS LTEVRAGKYD CVVGATPGDA EDFIFPEESW GAFESTFYVK KGNGWRYTDL
DSVKNIKVGV IGGYAYSDEF DAYVAANKAN AMVQVLNANN ALEQNIKKLN AGRIDAVVES
HLVMNAKLME MGLVDNITSA GALTESEPIF IACSPAKASS KIYSSLFSGG IQKLRASGQL
KTILDKYGLT DWK
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