| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1429 |
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| Symbol | |
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| ID | 4017454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1665089 |
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| End bp | 1665952 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955437 |
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| Product | thioredoxin-related |
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| Protein accession | YP_562438 |
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| Protein GI | 91792787 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3118] Thioredoxin domain-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000020457 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCTA TTATTCGTCT CACTAAAGAA AACATTCAAG CTGTGGTGGA CCAATCTGCC
ACTAGGCTGG TGATGCTTAC TTTTTGGGCT CAGCAGCAAG CTGAAAGCGT GCAAATGCTT
AACACGTTAG AGCAGATAGC CAACAGCCAG CAAGGGCGTT TTATTCTCGC CAGTGTTGAT
TGTGAAACTG AGATGGAAAT TGCCAACTAT TTTCAAATTC AGGCATTGCC AACCACCATG
CTGCTGGAAA ATGGTCGTCC TCTTGATGGC TTTTCCGGCG TACAAGACGC AGAGCAAGTC
ATGGCTATGC TAGATAAGCA TCTTCCGCCC CAGTGGAAGG ACGATGTGGA TGAAGTCAAA
ACCCTCTTGG CTCAAGGTGA GTTAACGGAT GCGGATCTCA CAGCAATCTT AAAGCGATTA
AAACAGGCTT ATGAAGACTC AGGAAAACAA GCTGAAATAG CACTGTTAAT GGCCGATGTT
CAGTTACAAC TTGGCGAGTT AACCGAGGCT AAAGTGAGCT TGGATGTGAT TGGTCTTGCA
GATCAAGACA GTTATTATCA CAGCTTGATG GCTAAGCTTG CCTTGGCATT AGATGCCACC
GACACCCCAG AAATTAGGCA GCTGCAAGAA ACGGTTGCTG CCGCGCCTGA TGATTTGCAA
GCCGTGTTAG CACTGGCTAA AGCATTACAC AAGACTAAGC GTGACGAAGA GGCCCTAGAT
GCCTTATTCG TTATTCTTCA AAAAGACTTA ACCGCCTTAG ATGGCCAAGT TAAACAAGTC
TTTATGGAAA TGCTCACCGC CATAGGCCAA GGCAATGCCA TTGCCAATCA GTATCGCCGC
AAACTTTATA CCTTACTGTA TTAA
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| Protein sequence | MEPIIRLTKE NIQAVVDQSA TRLVMLTFWA QQQAESVQML NTLEQIANSQ QGRFILASVD
CETEMEIANY FQIQALPTTM LLENGRPLDG FSGVQDAEQV MAMLDKHLPP QWKDDVDEVK
TLLAQGELTD ADLTAILKRL KQAYEDSGKQ AEIALLMADV QLQLGELTEA KVSLDVIGLA
DQDSYYHSLM AKLALALDAT DTPEIRQLQE TVAAAPDDLQ AVLALAKALH KTKRDEEALD
ALFVILQKDL TALDGQVKQV FMEMLTAIGQ GNAIANQYRR KLYTLLY
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