Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1419 |
Symbol | |
ID | 4017444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1655508 |
End bp | 1657622 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637955427 |
Product | anaerobic ribonucleoside triphosphate reductase |
Protein accession | YP_562428 |
Protein GI | 91792777 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
TIGRFAM ID | [TIGR02487] anaerobic ribonucleoside-triphosphate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGTAG TCATAAAAAG AGATGGATGT CGTACAGTAT TTAATGCCGA GCGTATTCAA GAGGCCGTTA TCGCGGCCAT GGCATCGGCG AACAAACAAG ATGTGGATTA TGCCTGCACC TTGGCAGAGC AGGTTAGGCA ACAAATGCAA GGCAAGCGAG AAGTCGACAT ACACGAGCTG CAAGATGCCG TTGAAAACTT ACTCATGGCG GGCCCTTATA AAGCCGTGGC CCGCCATTAT ATTGAATATC GCCATGACAG AGACTTATGC CGTGAAGCCA AGAGCAAGCT CAACCAGCAG ATTTTAGGCT TAGTAGAGCA AAGTGATGCA GCACTTTTGA ATGAAAATGC CAATAAAGAT GCCAAAGTCA TCCCAACTCA ACGTGATTTG TTAGCGGGCA TTGTCGCCAA GCATTATGCC AAAAGCCATT TATTGCCAAA AGACGTGGTT CAAGCTCATG AGCGCGGTGA GCTGCATTAT CACGACTTAG ATTATGCGCC GTTTTTCCCC ATGTTTAACT GCATGCTTAT CGACTTAGGC GGCATGCTCA CCAAGGGCTT TAAGATGGGT AATGCCGAAA TTGAGCCGCC TAAATCCATA GCTACGGCGA CAGCCGTTAC AGCGCAAATT ATCGCTCAGG TTGCCAGCCA CATTTATGGC GGCACCACCA TTAACCGTAT CGATGAAGTA TTGGCAGAAT TTGTCACTAA GAGCTACCAA AAACATTTAG CGACAGGCAT AGAGTGGCAA GTGGCAGACG CAGCAAAGTA CGCGCTATCC CTAACAGAAA AAGAGTGTCA CGATGCTTTT CAATCCCTTG AATATGAAGT AAATACCTTG CACACGGCTA ACGGGCAAAC CCCGTTTGTG ACCTTTGGTT TTGGTTTAGG CACCTCTTGG GAGTCAAAAC TCATCCAACG CTCCATGCTC AATGTGCGCC TCGAAGGCCT AGGTAAAAAC CGCAAGACAC CGGTATTCCC AAAGCTTGTG TTTGCCATTA AAGCGGGACT GAATCATAAG CTGGGTGACA ACCACTATGA CATCAAACAG CTGGCGCTTA AGTGTGCAAG CCTGAGAATG TATCCCGATA TTCTTAATTT TGATCAAGTG GTTAAGGTCA CAGGTTCCTT TAAAACCCCC ATGGGTTGCC GCTCGTTCCT TGGCGCCTAT GAAGCAAATG GCGAGCTTAT CCATGAAGGT CGCAATAACT TGGGGGTGGT GAGTTTGAAC TTACCGCGAA TAGCTATTGA GGCTAAAGGT GATGAAGCTG CCTTTTATCA ATTGCTAGAT GCTCGTTTAC TTGTCGCTAA AAAAGCCTTA GATAGCCGCA TCAGCCGTCT CGATGGTGTA AAAGCTCGGG TTGCGCCGAT CCTCTATATG GAAGGGGCTT GTGGCGTGCG CTTAAAGGCT GATGATGAGA TAAGCAGTAT CTTTAAACAT GGTCGCGCAT CCATTTCATT AGGCTTTATT GGCTTACATG AAACCATTCA GGCACTTTTT GGCCAAGAAC ATGTCTTTGA TAGTGCTATT TTGCGAGAAA AAGCCCTTGA AATTATTCGC TATCTAAAAC AAACAACAGA TGCATGGAAG GCAGAAACGG GTTACGGCTT TAGTTTATAC AGCACCCCAA GTGAGAACCT CTGCAGCCGC TTTTGCGAGC TCGATAGCAG TGAGTTTGGA CTCATTAAAG GCGTGACAGA CAAAGGCTAT TACACCAATA GTTTTCATTT AGACGTTGAG AAGAAAGTTA ACCCCTTCGA TAAACTGGAT TTTGAAATGG CCTATCCCGC TATCACCAAT GGCGGCTTTA TTTGTTACGG TGAATACCCC AATATGCAGC ATAACTTATC GGCACTGGAG CAAGTGTGGG ATTACAGTTT TAGTCGGGTG CCCTATTACG GCACCAATAC CCCAATTGAT GAGTGTTATG ACTGCGGCTT TTTAGGTGAA TTTAACTGTA CCAGCAAGGG CTTTGTCTGC CCAAAATGCG GCAATCATGA GCCTAGCCGC GTGAGTGTGA CTCGAAGGGT CTGTGGTTAT TTAGGCAGCC CTGATGCCCG GCCCTTTAAT GCGGGTAAGC AAGAAGAAGT GAAGCGCCGC GTCAAGCATT TGTGA
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Protein sequence | MLVVIKRDGC RTVFNAERIQ EAVIAAMASA NKQDVDYACT LAEQVRQQMQ GKREVDIHEL QDAVENLLMA GPYKAVARHY IEYRHDRDLC REAKSKLNQQ ILGLVEQSDA ALLNENANKD AKVIPTQRDL LAGIVAKHYA KSHLLPKDVV QAHERGELHY HDLDYAPFFP MFNCMLIDLG GMLTKGFKMG NAEIEPPKSI ATATAVTAQI IAQVASHIYG GTTINRIDEV LAEFVTKSYQ KHLATGIEWQ VADAAKYALS LTEKECHDAF QSLEYEVNTL HTANGQTPFV TFGFGLGTSW ESKLIQRSML NVRLEGLGKN RKTPVFPKLV FAIKAGLNHK LGDNHYDIKQ LALKCASLRM YPDILNFDQV VKVTGSFKTP MGCRSFLGAY EANGELIHEG RNNLGVVSLN LPRIAIEAKG DEAAFYQLLD ARLLVAKKAL DSRISRLDGV KARVAPILYM EGACGVRLKA DDEISSIFKH GRASISLGFI GLHETIQALF GQEHVFDSAI LREKALEIIR YLKQTTDAWK AETGYGFSLY STPSENLCSR FCELDSSEFG LIKGVTDKGY YTNSFHLDVE KKVNPFDKLD FEMAYPAITN GGFICYGEYP NMQHNLSALE QVWDYSFSRV PYYGTNTPID ECYDCGFLGE FNCTSKGFVC PKCGNHEPSR VSVTRRVCGY LGSPDARPFN AGKQEEVKRR VKHL
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