| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1387 |
|---|
| Symbol | |
|---|
| ID | 4017350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 1617224 |
|---|
| End bp | 1618249 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637955389 |
|---|
| Product | zinc-binding alcohol dehydrogenase |
|---|
| Protein accession | YP_562396 |
|---|
| Protein GI | 91792745 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2130] Putative NADP-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATA ACCAGACAAA TCAACGCATA GTATTGGCAT CGCGTCCTTT TGGCTCCCCA
AAGGCTGATA ACTTCCGCCT TGAAGAGGCT GCAATTCCAA CCCCAGCTGC GGGTGAAGTA
TTACTGCGCA CTGTGTATTT ATCCCTTGAC CCTTATATGC GTGGCCGCAT GAGTGAGGCT
AAATCCTACG CAGATCCTGT GGCAATCGAT GCCGTCATGG TCGGCGCGAC GGTGTGCCAA
GTGGTCAGCT CAAAAAACCC AAAATTTAGT GAAGGCCAAT GGGTACTTGC TTATACGGGT
TGGCAAACTT ACGGGATATC CGATGGCAGT GATTTAATGC CTCTTGGCGA TAACCCAACC
AACCCATCCT TTGCCTTAGG CATAATGGGC ATGCCAGGCT TTACCGCCTA CATGGGTTTA
TTGGATATCG GTCAGCCAAA AAATGGTGAC ACTTTAGTGG TTGCTGCAGC AACCGGTCCC
GTGGGCGCCA CTGTGGGTCA AATCGGCAAA CTTAAAGGCT GTTATGTGGT TGGCGTTGCT
GGCGGCGCTG AAAAATGCCG CTACGCTGTA GAAGTATTAG GCTTTGATGC CTGTATTGAC
CACCATAGCG ATAATTTTGC AGAGCAACTG GCCAAGGCTT GTCCACAAGG CATAGATATC
TACTTTGAAA ATGTGGGCGG CAAGGTATTT GACGCTGTAC TACCTATACT CAACACAGGC
GCTCGCATCC CGGTATGTGG CCTTATATCC CAATATAACG CCACAGAATT GCCACCAGAG
CCAGATCGCT TGTCTTTGCT GATGGGCACC TTGTTGGTGA AGCGCATCAA GATGCAAGGC
TTTATCATTT TTGATGATTA CGGTCATAGA TACCATGAAT TTGCCAGCGA CATGAGCCAA
TGGCTCGCTG AGGGGAAAAT ACATTACCGC GAACATCTCG TTGAAGGATT AGATAAAGCC
CCAGACGCTT TTATCGGCCT ACTCGAAGGC AAAAATTTTG GCAAGTTAAC AATAAAGATA
AGCTAA
|
|---|
| Protein sequence | MSNNQTNQRI VLASRPFGSP KADNFRLEEA AIPTPAAGEV LLRTVYLSLD PYMRGRMSEA
KSYADPVAID AVMVGATVCQ VVSSKNPKFS EGQWVLAYTG WQTYGISDGS DLMPLGDNPT
NPSFALGIMG MPGFTAYMGL LDIGQPKNGD TLVVAAATGP VGATVGQIGK LKGCYVVGVA
GGAEKCRYAV EVLGFDACID HHSDNFAEQL AKACPQGIDI YFENVGGKVF DAVLPILNTG
ARIPVCGLIS QYNATELPPE PDRLSLLMGT LLVKRIKMQG FIIFDDYGHR YHEFASDMSQ
WLAEGKIHYR EHLVEGLDKA PDAFIGLLEG KNFGKLTIKI S
|
|---|
| |