| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1320 |
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| Symbol | |
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| ID | 4017492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 1540104 |
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| End bp | 1541537 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637955317 |
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| Product | sigma-54 factor, interaction region |
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| Protein accession | YP_562329 |
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| Protein GI | 91792678 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAAA TAGAACAACG GATCCTAATC GTCGCCAGCC CCTCAGAGCG CATAACGCGT
CTGTGCTGTA TTTTCGAATT TCTAGGTGAA CAGTGCGAGT TGATCGCTTC AGAGAAGCTT
TCATCATTGA CAGAGCACAC CCGCTTTCGT GCGTTAGTGG TGGCTAATAA GCAGATGTCG
CTTGATACGC TTAAGTCGCT GCAAAAAACC ATACCTTGGC AACCTATATT ATTACTCGAT
GGTGAGGATG AATTAGTTAG CGCTAACGTT CTTGGTAATA TTGATGAGCC CTTCAATTAC
CCTCAGCTCA CTGAATTGCT GCATTTTTGT CAGGTTTATG GCCAAGCAAA AAAACCACAA
GTACCTACCA GTGTCAATCA AACTAAATTA TTCAGAAGCC TCGTGGGACG CAGCGATGGT
ATTGCCCATG TGAGGCATCT CATTAATCAG GTCGCAAGTT CTGATGCCAC TGTACTTATT
TTGGGTCAAT CAGGTACAGG CAATGAAGTG GTTGCCCGTA ACATTCATTA TTTATCTGAG
CGTAGCGATG GGCCTTTTAT TCCCGTCAAT TGCGGTGCAA TTCCAGCAGA GTTACTGGAA
AGTGAATTGT TCGGCCATGA AAAGGGCTCT TTTACTGGCG CTATCTCTTC TCGTAAAGGT
CGTTTCGAAC TTGCCGAAGG CGGTACACTC TTTCTTGATG AAATTGGTGA TATGCCAATG
CAGATGCAGG TTAAATTACT GCGTGTTTTA CAAGAGAAAG TATTCGAACG TGTGGGTGGT
TCAAAAACCA TTAGCACCAA TGTGCGCGTA GTGGCGGCAA CTCACAGAAA TCTTGAATCC
ATGATAGTGG AAAATGAATT TCGTGAAGAC TTATATTATC GTTTGAATGT ATTCCCCATC
GAAATGCCAG CGCTGAGCGA GCGCCGTGAT GATGTGCCCT TGTTGTTGCA AGAGCTCGTT
AGTCGTGTCT TCAACGAAGG CCGAGGTAAA GTGCGTTTTA CCCAGCGCGC CATCGAATCA
CTTAAGGAAC ATAACTGGTC GGGTAACGTC CGAGAATTGT CAAACTTGGT GGAGCGTTTA
ACCATACTCT TCCCTGGCGG TTTAGTGGAT GTTAACGATT TACCAAATAA ATACCGTTAT
ATTGATGTTC CTGAATACAG CGTGGAAATT GATGAAGAAC AGCTCGAACG TGACGCGTTA
GCTTCTATAT TCAGCGATGA AGAGCCGGTA GAACTGCCTG AGACTCGATT CCCCTCAGAG
CTTCCACCTG AAGGGGTTAA TCTTAAAGAT TTATTAGCTG AACTTGAGAT TGATATGATC
CGCCAAGCCT TAGAACAACA AGACAGTGTA GTTGCTAGAG CGGCTGAGAT GCTGGGGATA
CGCAGAACGA CCTTGGTAGA AAAAATGCGC AAATACGGTA TGTCTAAAGA TTAG
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| Protein sequence | MMQIEQRILI VASPSERITR LCCIFEFLGE QCELIASEKL SSLTEHTRFR ALVVANKQMS
LDTLKSLQKT IPWQPILLLD GEDELVSANV LGNIDEPFNY PQLTELLHFC QVYGQAKKPQ
VPTSVNQTKL FRSLVGRSDG IAHVRHLINQ VASSDATVLI LGQSGTGNEV VARNIHYLSE
RSDGPFIPVN CGAIPAELLE SELFGHEKGS FTGAISSRKG RFELAEGGTL FLDEIGDMPM
QMQVKLLRVL QEKVFERVGG SKTISTNVRV VAATHRNLES MIVENEFRED LYYRLNVFPI
EMPALSERRD DVPLLLQELV SRVFNEGRGK VRFTQRAIES LKEHNWSGNV RELSNLVERL
TILFPGGLVD VNDLPNKYRY IDVPEYSVEI DEEQLERDAL ASIFSDEEPV ELPETRFPSE
LPPEGVNLKD LLAELEIDMI RQALEQQDSV VARAAEMLGI RRTTLVEKMR KYGMSKD
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