Gene Sden_1309 details

Gene Information

• Locus tag: Sden_1309
• Symbol: flgH
• ID: 4017303
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella denitrificans OS217
• Kingdom: Bacteria
• Replicon accession: NC_007954
• Strand: +
• Start bp: 1528505
• End bp: 1529179
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637955306
• Product: flagellar basal body L-ring protein
• Protein accession: YP_562318
• Protein GI: 91792667
• COG category: [N] Cell motility
• COG ID: [COG2063] Flagellar basal body L-ring protein

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAAT ACATAATGTT ACTTATGGTT TCTCTGCTTA GTGCTTGTAG CTCTACGCCG 
AGAAAGCCCA TTCCTGATGA TCCTTTCTAT GCACCTGTGT ATCCGGATGC ACCGGCCACA 
CAGACGGCGG CGACCGGCTC TATTTTCTTA GATTCGCAAG CCTCTAGTTT GTACTCTGAT 
ATCCGTGCTC ACAAAATTGG CGACATTATT ACTGTGGTGT TGATGGAATC GACCCAAGCG 
AAAAAAAGTG CCACTAATGA CATTAAGAAA GGCTCAGATA TGAGCATGGA CCCGCTGTTT 
GCTGGGGGAG GCAATGTCAC TATCAAGGGC GTGCCACTGG ATCTTAAATA CAAGGATGCC 
TACAACACAA AGCGAGAGTC AGACGCAGAT CAAAGCAACA GTTTAGCGGG GAGTATCTCG 
GCTAACGTAA TGCAAGTGCT GAGTAATGGC AACTTGGTTA TCCGCGGAGA AAAGTGGATA 
TCTATCAATA ATGGCGATGA ATTTATTCGG GTGACCGGCA TAGTTCGTAG CCAAGATATT 
AAGCCCGATA ACACCATAGA GTCTGTGCGA GTTGCGAATG CGCGCATTCA ATATAGTGGC 
ACTGGGACAT TTGCTGACGC ACAGAAAGTG GGTTGGCTTG GGCAATTTTT CCTCGGTGAA 
TGGTGGCCCT TTTAG 

 

Protein sequence

MNKYIMLLMV SLLSACSSTP RKPIPDDPFY APVYPDAPAT QTAATGSIFL DSQASSLYSD 
IRAHKIGDII TVVLMESTQA KKSATNDIKK GSDMSMDPLF AGGGNVTIKG VPLDLKYKDA 
YNTKRESDAD QSNSLAGSIS ANVMQVLSNG NLVIRGEKWI SINNGDEFIR VTGIVRSQDI 
KPDNTIESVR VANARIQYSG TGTFADAQKV GWLGQFFLGE WWPF