| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1284 |
|---|
| Symbol | |
|---|
| ID | 4017571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 1502961 |
|---|
| End bp | 1503917 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637955280 |
|---|
| Product | MaoC-like dehydratase |
|---|
| Protein accession | YP_562293 |
|---|
| Protein GI | 91792642 |
|---|
| COG category | [I] Lipid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins
[COG2030] Acyl dehydratase |
|---|
| TIGRFAM ID | [TIGR03585] pseudaminic acid biosynthesis N-acetyl transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATA TAAATTTATT GCCATTAACG TCTGCATATC TTGACCTCAT CCTAGAATGG
CGAAACAATC CGGAAGTCAG ACGTAATATG TATACAAGTC ATGTTATTTC AAAAGCAGAA
CACTATGCTT GGTTTAAGAA ATTAGAAAGT GACAATACTA AACAGTGCTT CATCTTTGTA
CTTAATGGTG TGCCCTCTGG ATTTATAAGT TTTGTTGATA TAAATCTAAA TTCAAAATCT
GCTACTTGGG CATTCTATTC TGGTAACACT TCAGTTAGAG GGATTGGTTC GCTGATGGAA
GTCTCAGCGT TGAACTATGC ATTTAGCACT CTGGGTTTAC ACAAACTCTC TTGTGAGGTG
TTAGAGTTTA ACAATATGGT AGTAAGATTT CATGAAAAAT ATGGTTTTCA CGTTGAAGGA
GTTTTTAAAA AACATCATTT TTCAGAGGGT GAGTATTGGG ATATATATCG CCTTGCAATT
TTTAATGAAG AGTGGGCTCG ATGTAAATTA GAGATTAACT TAAAAAAGCA ATCAATTTCT
CCTGGTTCCT CTTATCGAGA AAATGTGTTT TTTACGAATG AAAATATCAT TGGATTTTCT
GCATTAAGTG GAGATTGCAA TCAAATTCAT CTTAACAAGC AATACGCCAT TAAAAATGGT
TTTGACAATA ATCTTGTGCA TGGTTTTCTT GTCGGGTCTG TCTTTTCTAA AGTGTTTGGA
ACCCGCTTTC CGGGTGATGG CTGTATATAT ATTAGTCAAT CCCTGTCTTT TTTGAGTCCC
GTATATCCTG ATGACTTACT CGAGGCATCA TTTGTTGTAT TGTCTAAAAT AGGGCGTAAG
CTAGTTGTTG AGACTTCAAT CACAAACCTT CACTCTAACA AAAAAGTTAT AGATGGTGTT
GCTGAATTGT TGATATCGAT GGATTCGCAA ATAGGGTATT TAAATCAATA CTTGTAA
|
|---|
| Protein sequence | MNDINLLPLT SAYLDLILEW RNNPEVRRNM YTSHVISKAE HYAWFKKLES DNTKQCFIFV
LNGVPSGFIS FVDINLNSKS ATWAFYSGNT SVRGIGSLME VSALNYAFST LGLHKLSCEV
LEFNNMVVRF HEKYGFHVEG VFKKHHFSEG EYWDIYRLAI FNEEWARCKL EINLKKQSIS
PGSSYRENVF FTNENIIGFS ALSGDCNQIH LNKQYAIKNG FDNNLVHGFL VGSVFSKVFG
TRFPGDGCIY ISQSLSFLSP VYPDDLLEAS FVVLSKIGRK LVVETSITNL HSNKKVIDGV
AELLISMDSQ IGYLNQYL
|
|---|
| |