Gene Sden_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1167 
Symbol 
ID4017691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp1343197 
End bp1343850 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content39% 
IMG OID637955157 
Productthymidylate kinase-like protein 
Protein accessionYP_562176 
Protein GI91792525 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAATCG CTCTTACGGG TGCTGATGGT GTAGGTAAAA GTACGGTTTC AAAGTTACTC 
TTACAAGAAG TGGCCCATCA TGGTAAGCGT TTTAAAACGT TGGACCGATG GAATATGTTA 
GATACTTCGC TATTTCCTCA AAGTCGATTT ATCAGTGCGC CACTTCCTGA GGTAAAGCAG 
TGTGTCGCAG AAATGGAAGG ACCCTCTCGA TTCTTATTTA TTCTTTGGAC AATATACGGC 
GTCCTTGAAT CTTATGACCC AGCCTCTCCT CACATCACCT TTATAGATAG CTATTGGATG 
AAACATGCAG CAGCAGAGGT GGCTTATGGA TTACCTGAAA AATTTGTTTT GAATATTATT 
GAATTACTTC CAAAACCGGA TTTGACCATT CTGCTTGATC TGTCACCAGA ACTAGCTTAT 
GAACGTAAAG AAAAATCTGG ATTTGCTGAT TTAAATTATT ATGAATGCGG AATGGATAAA 
ACGCGCTCTT ACAATAGCTT TATCCAGCAT CAAAGCAAAA TTCGTTCTCA GTTATTATGT 
TGGGCTGACA GCAATAAATG GCACAAAATA GATACTTCCA GACCGGTTGA GGAAGTTGCA 
GCAGCAGTGT CCGGATTAGC TATTGAACAT TTTTTTGATA CTAAAAGTCA TTGA
 
Protein sequence
MLIALTGADG VGKSTVSKLL LQEVAHHGKR FKTLDRWNML DTSLFPQSRF ISAPLPEVKQ 
CVAEMEGPSR FLFILWTIYG VLESYDPASP HITFIDSYWM KHAAAEVAYG LPEKFVLNII 
ELLPKPDLTI LLDLSPELAY ERKEKSGFAD LNYYECGMDK TRSYNSFIQH QSKIRSQLLC 
WADSNKWHKI DTSRPVEEVA AAVSGLAIEH FFDTKSH