| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1114 |
|---|
| Symbol | |
|---|
| ID | 4017657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 1278498 |
|---|
| End bp | 1279679 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637955106 |
|---|
| Product | metal-binding protein |
|---|
| Protein accession | YP_562125 |
|---|
| Protein GI | 91792474 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCCA TAAGAAGTTT GCTAAATGAA GCTATTGGGA AACTAAATCA AAATAGTCAT
GCTCATCTTG TAGACTGTAC ATTGCAAGCT TCGATTATGA GTGATAACGA GCAATGTTGG
TGCTTAAGTG GCCGTTTATA CAAAGACTGT CATAAAGAGC GTAACCTAAA ACGAGAGCTC
AGTGAGCATG AAGTCAGAAA TAAAGTAAGC GCTATTTTTG ACCAAAATAA ATATTGCTGT
GCTGAATTTG ATAAAGAAAA CTGTGTATTT GAGATCAGTA AGGCACATAC AATTCAAAAG
GGTAAGGTAC TTTCTAGTTT TGCTGAAAAT GGTCATGTGG GGACGTTCTA CCGAAATCTA
AACGGTATAG ATAATCCCAC TAGATTAAAA GCTGGCATTG AGAAAAAAGC ATCAATCTTT
TTGGGTTTTT GTAAGTATCA TGATACTGAA TTGTTCAAAT GTATTGAGCT AAATGGTTTT
TCTAAAACAA AAGAAAATTG TTGGGCTAGC TCATATCGCG CAGTTTGTCA TGAGTACTAC
CAAAAGAAAG CCGCTATTGA TGCTACCGAT TGGCAGAGAA AGTACTTGGA CAGTGGACTA
GATGTGTATC ATCAAGTTTT TCTTCAAGAG AGACTGTACA TTCACCAAGT TAACATTGAG
AAGGGGTTCA GTGACATAGC TCTAATCAAA GTTGCTTACG AGGATATCAA AGTCAATAGT
CAAATTGATG AAATTATTTC TTATGTTCTT GAGTTTGATG CACCGCTTAC AATCGCAGTA
TGTGCAAGCA TTTCTCCATA TTTTGACCTT AATGGAATAA AAATCCAAAA TATAGGTTAT
GCAAATGAAA AATTTCAGCA TTTCTCTATT TCTACCGTGA CATTAAACGG TAATGCGGCT
TACGTAGTAA GTCACCTCAA AAAACATGAC ACTATCGGGA ATTACTTAAA AGAGGTGTTA
TCCATGCCTC TTGCTTACAT AAATAATTGG TTAACAACCT GTATATTTGC GTACACTGAA
AACAACTATT TTCGTTTATC TTGGTGGGAT TCATTAGATG AAAACACGAG GATGGATATA
TATAATTTGT TTTTGTCTGA AAATTACACG AAGACTTTAG ATTACAATGA CTTAGTTAGT
CGATCTATAT CTAGCTCTCT TGTCTCAATT GAACGGGTTT AA
|
|---|
| Protein sequence | MSSIRSLLNE AIGKLNQNSH AHLVDCTLQA SIMSDNEQCW CLSGRLYKDC HKERNLKREL
SEHEVRNKVS AIFDQNKYCC AEFDKENCVF EISKAHTIQK GKVLSSFAEN GHVGTFYRNL
NGIDNPTRLK AGIEKKASIF LGFCKYHDTE LFKCIELNGF SKTKENCWAS SYRAVCHEYY
QKKAAIDATD WQRKYLDSGL DVYHQVFLQE RLYIHQVNIE KGFSDIALIK VAYEDIKVNS
QIDEIISYVL EFDAPLTIAV CASISPYFDL NGIKIQNIGY ANEKFQHFSI STVTLNGNAA
YVVSHLKKHD TIGNYLKEVL SMPLAYINNW LTTCIFAYTE NNYFRLSWWD SLDENTRMDI
YNLFLSENYT KTLDYNDLVS RSISSSLVSI ERV
|
|---|
| |