Gene Sden_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1105 
Symbol 
ID4017648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1266647 
End bp1267183 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content50% 
IMG OID637955097 
Product(2Fe-2S)-binding 
Protein accessionYP_562116 
Protein GI91792465 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGT CCATTAAACT GACCATAAAT AACCAAGCTG TGGGCCCCAT TGAAGTGACT 
GATGGCGTGA TGATGATAGA GTTCTTGCAC GAGTACTTAA ACCTTACCGG GACCAAGTTT
GGCTGCGGCG CTGGGGTATG TCATGCCTGC ACTGTGATTG TCGATGATGA ACAAGGCATG
AGCGAAGTCG TGCGCACTTG CATTAATGGC GTCGAGCGTT TCAATGGCAA GCGCATTCGC
ACCATTGAAG GTCATGCCAA GCTCAATGAA CAAGGAGAGA TCACCGCCCT GAGCCCAGTG
CAGCAAGCAT TTTTGGAGCA TTTCTCGTTT CAATGTGGTT GGTGCACCTC AGGTTTTGTC
AATGAAGCCA CGGCGCTAAT TGAACGGCTG GAGCGAAAAC CTATCCCCAG CGCTCAAGTT
GAAGACGCCA TAGAAGAAGC CTTAGGCGAA CATGTTTGCC GCTGCACTGG CTATGTCAAA
TATTACGCCG CAGTCAAAGA CGTGATCCTC AGGACAAAGG GGCTAACCCT CTCATGA
 
Protein sequence
MNQSIKLTIN NQAVGPIEVT DGVMMIEFLH EYLNLTGTKF GCGAGVCHAC TVIVDDEQGM 
SEVVRTCING VERFNGKRIR TIEGHAKLNE QGEITALSPV QQAFLEHFSF QCGWCTSGFV
NEATALIERL ERKPIPSAQV EDAIEEALGE HVCRCTGYVK YYAAVKDVIL RTKGLTLS