| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1067 |
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| Symbol | |
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| ID | 4016783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1218715 |
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| End bp | 1220772 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955059 |
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| Product | Male sterility-like protein |
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| Protein accession | YP_562078 |
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| Protein GI | 91792427 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3320] Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT CATATGGCTC AAACGGTTTA TACGATGTTA TAAAGCAAGA TTTATATACA
GACAATGAAG CAATATTGCT AACCGGTTCC ACAGGTTTTT TAGGGGGCCA CTACCTGTAT
TGGAAACTCC ACACCCCAGG AAAAGTGTTT GTATTAGCCA GGGGGGAAGA TGAACAGCAA
GCCCACCAGC GAGTGTGCGA TAACCTGGCA AAATGTGCCA AGAGTTATAA TTTACCGGAC
ATTCCTGCAG ACCTATTAGC CGAACGCCTT GTGTGTGTTA AGGGTGACCT TAAAAAACCA
GGCCTTGGCC TACAAGCCGA ACAAATGGCG CTATTGCAAC AAAGCAAGAT TGCCGAAGTG
TGGCATTTTG CCGCCAGCTT ATCTTATCGC TGGGAAGACA AAGACAAGAT AGATGCGACC
AACATCAGCG GCACAGAACA CTTGCTTGAG TTATGCCACG GCTTAGCTGC CGGGCGCTTT
ATCTATATCT CCACCGCGTA TACCTCAGGT AAGCAAAGCG GTGATATTAA AGAAACCTTG
CACAGTGACC GCGAAGGCTT CACTAATTAT TATGAACAAA GTAAATGGTC AGCTGAAAAG
CTTATTCATG AATATACCCA GCAACGCAAT ATCGCCTGCA CCATAGTACG TCCTTCAATC
ATTCTCGGCC CAGAGCTGAC TCAATGCAGC GGCGGCACAC GTTTTGGTTT ATATGGCCTG
TTCCAAGAGA TGTATCAGAT GCGTGACACC TTGTCACAGG TGAAACGCAA TCTTAGATTG
GTGGGCAATC CCCAAGCCGT GGGTAACTTC ATCCCGGTGG ATCAAGTGGT GCTTGATTGC
CTCTACTTAA AATCCATCGA TTTTGGTGAT CAGCTGGTCT ATCACTCGGT AAATTCGAGC
GATCTCAAAG TCAGCGACGT GATCAAAAAG TGCGAACACT ATAACCAACT CGATTGCATT
GAAATCGTCC AAGCCCGTGA AGGTAAGGTG TCTTCCTTTG AGTCTTTGTT CGACAGTAAA
ACTCGCTTTT ACGAAGGCTA CTACGACACA ATGAAGCAAT TTAACCGGGT TCTTCCAAAG
CATAATCCCA TGACGATGGA GAAAATTGAG AATTTTGTGC GTCTGTTTGC CGATGAATTA
AAATCTGAGG AACAAGGGCA TATTTTCCTT CGCCATCAAG TGAAAAGTTG GGACGCAGAA
ACCTTAACCG TACATACCTT AGGCAATCCA GATGCCTCTC CCATAGTGAT CGCCAATGCC
TATGGCATGC CCGTCGATTT TATCGCGCCA TTAGCCCGCA GACTGAGTGA GCATTACTTT
GTGCTGACTT GGGACACACG TTGGGTCCCC GCAGTCACCC AAACCTTCGA GCTGGAGAAG
TGCAACTCAT TGACTCAAGC CAAAGATGTG ATAGCCATCA TGGATCATTT TGAACTGGCA
ACGGCGGCCG TTGTGGGTTG GAGCAGCGGC GCACAAACTT GCCTAAGAGT GCTCAATGAG
TTCCCCGCAC GGATAAACGG CGGCGCACTG CTTAATGGCG GCGTGTCCCT AAAACTGCAA
CCTGCCATTC CTGTGAGTCA ATTCGAGGAA AGCTTGAAGT CCTTGTTACC TAAGATCAGT
GCCAATCGAC GCATGGCCGA GTTTTATTGC CAATTAATTT ACGGCAACCT AGAGGCGAAG
GCGAGTGATG AGCAGGCCAT AGACTCAGTG CTCACCAGCA CAGACCCACA CCTGTTATAC
ATGACCAGTA TGCCCTTTAG AAATGCCGAG TCCTTGTTTC GCTACGCCAA CATGATGCAT
CAGATGTTTA ATGAGCAAGA TGATGCCTTC ACAAGCGGTA TTTCGGCGCC AGTACTGGTA
TTGGGATGCG AGCATGATGA AGTCACCCAC CCCAAGCTTG CCCAAGCCTT GGCTGACAAC
TTGTCCAACA GTGAATTGGT GATGCTAGAA AACGCGGGGC ATTTTGCTCA ATATTATGAT
CATCATGTGG CTAATTTAGT TGCCGATTTT GTCAGCCGTA TCAAGACTCA TAGCAGACAA
GCCCTATGCC AGCAATGA
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| Protein sequence | MKKSYGSNGL YDVIKQDLYT DNEAILLTGS TGFLGGHYLY WKLHTPGKVF VLARGEDEQQ
AHQRVCDNLA KCAKSYNLPD IPADLLAERL VCVKGDLKKP GLGLQAEQMA LLQQSKIAEV
WHFAASLSYR WEDKDKIDAT NISGTEHLLE LCHGLAAGRF IYISTAYTSG KQSGDIKETL
HSDREGFTNY YEQSKWSAEK LIHEYTQQRN IACTIVRPSI ILGPELTQCS GGTRFGLYGL
FQEMYQMRDT LSQVKRNLRL VGNPQAVGNF IPVDQVVLDC LYLKSIDFGD QLVYHSVNSS
DLKVSDVIKK CEHYNQLDCI EIVQAREGKV SSFESLFDSK TRFYEGYYDT MKQFNRVLPK
HNPMTMEKIE NFVRLFADEL KSEEQGHIFL RHQVKSWDAE TLTVHTLGNP DASPIVIANA
YGMPVDFIAP LARRLSEHYF VLTWDTRWVP AVTQTFELEK CNSLTQAKDV IAIMDHFELA
TAAVVGWSSG AQTCLRVLNE FPARINGGAL LNGGVSLKLQ PAIPVSQFEE SLKSLLPKIS
ANRRMAEFYC QLIYGNLEAK ASDEQAIDSV LTSTDPHLLY MTSMPFRNAE SLFRYANMMH
QMFNEQDDAF TSGISAPVLV LGCEHDEVTH PKLAQALADN LSNSELVMLE NAGHFAQYYD
HHVANLVADF VSRIKTHSRQ ALCQQ
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