Gene Sden_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1064 
Symbol 
ID4016780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp1215925 
End bp1216512 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content42% 
IMG OID637955056 
Producttransciptional regulator 
Protein accessionYP_562075 
Protein GI91792424 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGTAAAA TCCACTATAG TAGACACCTT ATGAATTTTG ATTATATTGG CTTGTTCATC 
CGAAGTTTCA GGCAGGCAAA CCATGAAAGC TTGCAATCAC TTGCTGATAG ATCTGGGGTG 
AGCCGCTCAA TGATATCCCA GATAGAAAGT GGTCAAAAAA GCCCAACTAT CATGATATTG 
GCTAAATTAG CTGATGCGAT GAGTATAAGC CTTGAGGATT TTATTAAGGT GCCAAAAGGG 
TTAAATACTT TGGAAGTGCT GACGCCATCG GAAAGTAATA TTGTCAGTAA AAGCGCTAGT 
GCCTTTGTTT GTCATCAATT GGCGGCTAGA TCGAGTTCAT CCCCGGCGGA TCTCTATCAG 
TTCTATTTTA TCAAGGCGGG TAAAACTCAA TTTTCAGCCA ACCCTAAATC CACAGCGGTT 
AAATATGTCT GGGTCGAACA GGGGGAGCTG AGCCTGTACT TATCTTCAAA ACAGGTTTCT 
GTGAAAGCAG GCCAGGCGAT AAAATTCAAT GCCTCCATAC CCCATAGGTT CGAGTGTCGC 
CAAGGCATTT TAGCTAAAGG AACCTTCTTT ATTGCCTATG AAAATTAA
 
Protein sequence
MCKIHYSRHL MNFDYIGLFI RSFRQANHES LQSLADRSGV SRSMISQIES GQKSPTIMIL 
AKLADAMSIS LEDFIKVPKG LNTLEVLTPS ESNIVSKSAS AFVCHQLAAR SSSSPADLYQ 
FYFIKAGKTQ FSANPKSTAV KYVWVEQGEL SLYLSSKQVS VKAGQAIKFN ASIPHRFECR 
QGILAKGTFF IAYEN