| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0979 |
|---|
| Symbol | |
|---|
| ID | 4016749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | + |
|---|
| Start bp | 1118839 |
|---|
| End bp | 1119606 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637954969 |
|---|
| Product | 2OG-Fe(II) oxygenase |
|---|
| Protein accession | YP_561990 |
|---|
| Protein GI | 91792339 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3145] Alkylated DNA repair protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.716727 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCCA TTCACGCTAA AGAATCACAA ACTGCTGATG CTAATTCTGC AGGCGCAAAT
CCTGCGAGTT TGAGGCAAGA TGGGTCATTG CAGCAAGTAA GCTTTGACTT TATTGAGCGC
CATAACAATG CTCATGGCAG TGGCGCTAAG GGAGCTGATT TAGGCGAACG TTGTGAACAC
AAGGTAAGGA AATCCCCGCC TGTGACTTGG TTAACGGGAT TTTTGAGCGT TCAAGAGCAG
CAGGCTTTAT TGGATGATGC TAAAAGCTAT CCTTTTGAGC GCCCTCAGAT TGAGGTTTAT
GGCAAACTTC ATCCTATCCC TCGTCAACAA GTTTGGTTTG CCGATGAAGA CTGTGGCTAT
CGCTATGCAT CACTCTTTAT TAGCCCTACA CCTTGGCCTG CATTGCTCAT GCAGCTGAGG
CAAAGATTGC AAGCCGAATT GGGCTTAGTG TTCAATGGCG TGTTAGTGAA TTTTTATGCT
GATGGCCAAG ATACTGTGGG CTGGCACAGC GATGATGAAG CTGAAATTCG CAAACCTTCC
AGCATAGCGT CTATCAGTAT CGGTGCGACG CGAGACTTTC AAATTCGCCA CAAGCGCAGC
CAAGAGACCT TTACCTTACC TTTAGTCTCG GGGGATTTGC TTATCATGCA GCCTGGCATG
CAACAAACTT GGCAGCATGC CGTGCCTAGG CGAGCTAAGG TCAAAGCGCC GAGAATAAAC
CTCACGTTTA GGGAGCTTGT GCCCCAAAGG GATAATCATC TTATATAG
|
|---|
| Protein sequence | MSSIHAKESQ TADANSAGAN PASLRQDGSL QQVSFDFIER HNNAHGSGAK GADLGERCEH
KVRKSPPVTW LTGFLSVQEQ QALLDDAKSY PFERPQIEVY GKLHPIPRQQ VWFADEDCGY
RYASLFISPT PWPALLMQLR QRLQAELGLV FNGVLVNFYA DGQDTVGWHS DDEAEIRKPS
SIASISIGAT RDFQIRHKRS QETFTLPLVS GDLLIMQPGM QQTWQHAVPR RAKVKAPRIN
LTFRELVPQR DNHLI
|
|---|
| |