Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_0906 |
Symbol | |
ID | 4016715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 1032228 |
End bp | 1032791 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637954896 |
Product | NUDIX hydrolase |
Protein accession | YP_561917 |
Protein GI | 91792266 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCATT TAGCCACCAA TTATCATCAC GACACGCCTA AAGAGTTCGT CGCCCTGCAT CAATCAGCCA TGCTAACTCG GCCTGCCACT CGGGCTATCG TGCTCAAGGG GCAGCAGATA TTACTCCTCT ATACTGAGCG CTATCATGAT TACAGTTTGC CTGGCGGTGG CGTAGATGAA GGCGAAGCCA TTGAACTTGG GCTCATTCGT GAGTTACGGG AGGAGACGGG GGCCAAAGGC GTGAGCCAAA TTCGCCCCTT TGGCGTCTAT GAAGAATACC GTCCATGGCG TCGCGACGGC TATAGTGTGC TGAAAATGCT GTCTTATTGC TTTACTTGCC AGATAGAGGC CGAGCTGGGT GACACTGAGT TTGAACCCCA CGAAATCAAC AATGGCATGA CCCCAGTCTG GGTCGATATC GATGAAGCCA TCAATCACAA CCTTAGCACT ATGGCCAATA GTGAAAAGAA AGGCTTATCA ATCGAGCGAG AAACCTTCTT ATTGCAACTG ATAAGGGATG AGCTGATCCA GCCGTCATCT TTGCATGCTA ATGCGCTGAA ATAA
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Protein sequence | MRHLATNYHH DTPKEFVALH QSAMLTRPAT RAIVLKGQQI LLLYTERYHD YSLPGGGVDE GEAIELGLIR ELREETGAKG VSQIRPFGVY EEYRPWRRDG YSVLKMLSYC FTCQIEAELG DTEFEPHEIN NGMTPVWVDI DEAINHNLST MANSEKKGLS IERETFLLQL IRDELIQPSS LHANALK
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