Gene Sden_0906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0906 
Symbol 
ID4016715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp1032228 
End bp1032791 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content50% 
IMG OID637954896 
ProductNUDIX hydrolase 
Protein accessionYP_561917 
Protein GI91792266 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCATT TAGCCACCAA TTATCATCAC GACACGCCTA AAGAGTTCGT CGCCCTGCAT 
CAATCAGCCA TGCTAACTCG GCCTGCCACT CGGGCTATCG TGCTCAAGGG GCAGCAGATA
TTACTCCTCT ATACTGAGCG CTATCATGAT TACAGTTTGC CTGGCGGTGG CGTAGATGAA
GGCGAAGCCA TTGAACTTGG GCTCATTCGT GAGTTACGGG AGGAGACGGG GGCCAAAGGC
GTGAGCCAAA TTCGCCCCTT TGGCGTCTAT GAAGAATACC GTCCATGGCG TCGCGACGGC
TATAGTGTGC TGAAAATGCT GTCTTATTGC TTTACTTGCC AGATAGAGGC CGAGCTGGGT
GACACTGAGT TTGAACCCCA CGAAATCAAC AATGGCATGA CCCCAGTCTG GGTCGATATC
GATGAAGCCA TCAATCACAA CCTTAGCACT ATGGCCAATA GTGAAAAGAA AGGCTTATCA
ATCGAGCGAG AAACCTTCTT ATTGCAACTG ATAAGGGATG AGCTGATCCA GCCGTCATCT
TTGCATGCTA ATGCGCTGAA ATAA
 
Protein sequence
MRHLATNYHH DTPKEFVALH QSAMLTRPAT RAIVLKGQQI LLLYTERYHD YSLPGGGVDE 
GEAIELGLIR ELREETGAKG VSQIRPFGVY EEYRPWRRDG YSVLKMLSYC FTCQIEAELG
DTEFEPHEIN NGMTPVWVDI DEAINHNLST MANSEKKGLS IERETFLLQL IRDELIQPSS
LHANALK