| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0894 |
|---|
| Symbol | |
|---|
| ID | 4016703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 1020897 |
|---|
| End bp | 1021304 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637954884 |
|---|
| Product | transcriptional regulator PadR-like protein |
|---|
| Protein accession | YP_561905 |
|---|
| Protein GI | 91792254 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA TGGATGAAAA AGATATCGAA ACTAATGATC AGCTTATTGA TCCTTTAGTT
AAGAAATTTA GCAAGGAACT CAGCTCAGGT ACCTCAGCAC TGGTGTTGCT ATGCATTTTA
AACCATGCCG CAACGCCACT TTATGGGTAT CAAATTGCCC GGCTATTAGG TCACAGCAAT
ACCGATAAGC AAGGGGCTAT CTACCCAATA TTACGAAACA TGGAGGCCAA AGGCTTATTA
ACAAGCCAAA TGCAAGCATC CGAAAGCGGC CCACCAAGGA AGTACTTCAA GATATCAATG
CTTGGCAAAA ACGTACTGAA AGAATGGCTA GCTGTGTGGC ATCGCACTCA GTCTTTCGTT
AATCAGACAA TCGCAGGTCA AACAAAGGGA GAGAACGATG TTAAATAA
|
|---|
| Protein sequence | MEKMDEKDIE TNDQLIDPLV KKFSKELSSG TSALVLLCIL NHAATPLYGY QIARLLGHSN
TDKQGAIYPI LRNMEAKGLL TSQMQASESG PPRKYFKISM LGKNVLKEWL AVWHRTQSFV
NQTIAGQTKG ENDVK
|
|---|
| |