Gene Sden_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_0780 
Symbol 
ID4016730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp899409 
End bp900071 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content38% 
IMG OID637954765 
Producthypothetical protein 
Protein accessionYP_561793 
Protein GI91792142 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCAA AATTACCTCG TTGGGTCGAA TATGGTTCAT TTGTGCTTGC CTTGGTTGCA 
GGCTTTGTTA ATTCCATTGG GTTACTTGGA TTCAAACATC AATCCATTTC CCACTTATCT 
GGGATAACTA CACTTCTTGG AGCCAGTATT GTCAATTCAA CCTTGATTGA TGTTTTTCAT 
TTGGCCATAG TTATCCTTAG TTTTCTGGTC GGAGCCGCAA TCTCAGGTTA TTTTTTACGT 
AGTGGCGCAT TAAAATTAGG GCGAAATTAC AGCAGTCTTC TTTCGTTAGA AGGTATTTTT 
CTTTTAGGTT CGGTTTATTT TTTAGCAAAA GATGCATTAT ATGGTCATTA TTTAGCCTCC 
GCGGCTTGTG GATTACAAAA TGCCCTTGTC ACCACTTATA GTGGCGCGGT TGTTAGAACA 
ACCCATGTGA CTGGCATATT TACTGATTTG GGCATTATGC TTGGTGCCAA ATTGAGAGGA 
GAGCCATTGG ACACAAGAAA AGTATTGTTA TTTTTGCTAA TCATTACTGG CTTTGTTCTA 
GGTGGTACAT TTGGGGCCTA TTTTTATAGC ATCCTTAATT TTAAAGCCTT ATACATACCA 
GCAAGTATTT GTTTTTTCTT GGCGCTATCT TATGCCATCT ACAATGGAAA GTTTGGTCAT 
TAA
 
Protein sequence
MISKLPRWVE YGSFVLALVA GFVNSIGLLG FKHQSISHLS GITTLLGASI VNSTLIDVFH 
LAIVILSFLV GAAISGYFLR SGALKLGRNY SSLLSLEGIF LLGSVYFLAK DALYGHYLAS 
AACGLQNALV TTYSGAVVRT THVTGIFTDL GIMLGAKLRG EPLDTRKVLL FLLIITGFVL 
GGTFGAYFYS ILNFKALYIP ASICFFLALS YAIYNGKFGH