| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0615 |
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| Symbol | |
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| ID | 4017029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 700878 |
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| End bp | 702050 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637954600 |
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| Product | O-succinylhomoserine (thiol)-lyase |
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| Protein accession | YP_561628 |
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| Protein GI | 91791977 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCAGC ATAAATTAGC CACCTTGGCC GTTCGTCACG GCATAGAGTC GGATACTCAG
CATGGATCTG TGGTGCCACC GATTTATTTG TCGACCAATT ACAGCTTTGA AGGGCATCAA
CAGCCCAGAG AGTTTGACTA TAGCCGCTCG GGCAACCCAA CGCGTAACTT ATTGGCAGAG
GCGCTGGCAA AGTTAGAGCA AGGTCATAGT GCAGTTGTCA CTTGTACTGG TATGGCGGCC
ATCACCTTAG TCACCAGTTT GTTAGCCCCT GAAGATGTGT TAGTCATCCC CCATGATTGC
TATGGCGGCA GCTACCGATT GTTTACTCAC TTGGCAGCTA AGGGCAGTTT TAAGCTCGTG
GTTATCGATC AAAATGACGC TAATGCATTG GCAGACGCTC TGCAGCTTAA GCCTAAATAT
GTTTGGCTAG AAACTCCGTC GAATCCACTG CTTAGGGTGG TGGATATCAG CGCAATTTGC
CAACTGAGTC ATCAAGTGGG CGCTAAAGTG GTGGTGGATA ACACCTTTCT TTCCCCTGCA
TTGCAACAGC CATTAACCCT AGGGGCTGAC ATAGTGGTGC ACTCCACCAC TAAATACATT
AATGGTCATA GCGATGTTGT TGGCGGCGCC GTGGTGGCTA AAGATGCCGA CATTGGCGAG
CGACTCGATT GGTGGGCAAA TACCTTAGGT TTAACCGGTA GCGCGTTTGA TAGTTACCTG
ACCTTACGTG GACTTAGAAC ATTAAGTGTA CGAATGCGCC AACATCAGGA AAATACCCAA
CTAATTATTG AGTCCTTAAT TAACAGTCCA GTGGTGAATA AGGTATATTA CCCAGGTTTA
ACAGCCCACC CAGGTCACGA AATTGCATTA AAACAGCAAC AAGGTTTTGG TGGCATGGTA
AGTTTTGAGC TTAATGGTGG AGAAGCAGCA CTCGTGGCCT TCTTAAGTGA GCTTAAATTA
TTTAGTCTTG CCGAGAGCTT AGGGGGGGTG GAGAGTCTGG TTGCCGTGCC AGCCACCATG
ACCCACAGAG CCATGACGGC CAAGGCCCGT GATGAGGCTG GCATTAGTGA CACATTATTG
AGATTATCTG TCGGCATCGA AGATGGCGTT GATCTTGTCG CCGATATTGA AGCAGCCTTA
GCCGCTGTTG CAACACTGAA AGTCGTTGTT TAA
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| Protein sequence | MSQHKLATLA VRHGIESDTQ HGSVVPPIYL STNYSFEGHQ QPREFDYSRS GNPTRNLLAE
ALAKLEQGHS AVVTCTGMAA ITLVTSLLAP EDVLVIPHDC YGGSYRLFTH LAAKGSFKLV
VIDQNDANAL ADALQLKPKY VWLETPSNPL LRVVDISAIC QLSHQVGAKV VVDNTFLSPA
LQQPLTLGAD IVVHSTTKYI NGHSDVVGGA VVAKDADIGE RLDWWANTLG LTGSAFDSYL
TLRGLRTLSV RMRQHQENTQ LIIESLINSP VVNKVYYPGL TAHPGHEIAL KQQQGFGGMV
SFELNGGEAA LVAFLSELKL FSLAESLGGV ESLVAVPATM THRAMTAKAR DEAGISDTLL
RLSVGIEDGV DLVADIEAAL AAVATLKVVV
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