| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0587 |
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| Symbol | |
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| ID | 4016617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 669318 |
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| End bp | 670496 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637954572 |
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| Product | major facilitator transporter |
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| Protein accession | YP_561600 |
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| Protein GI | 91791949 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAACA CATTTTACAC TTTGCTCTGC ATACAGTTTC TCGTCACTTT TGCATTGATG
CTGCTGATCC CTGTGATGCC ACTTTATTTA CAGCAATTAA ATAATAATGT GCCATTGTCA
GGCTTTTGGT CAGCCGCCGC GATAGCTGCC CCCGCTATCG GTGCGCTCTT GAGTGCGCCG
ATGATCGGCA AAGGCTGTGA CCGCTTCGAG AAAAAAACCA TGCTGATGCT GACCCAGTGC
CTCTTTGTGA TATCGCTGTT CGCCATGGCA TTGGCTTCCA GTCTTATCAG CTTTTTAGTT
GCTCGTTTAT TGCTGGGGTT TGCCGGGATT TCTGTGGTGC TTACGGTCTA CTTCTGTCAT
GCCAGCTATC AGAGCGAAGC GCTGCAACTG GCTAAACAAC AGCGTGCCAT CGCACTGGCT
TGTCTATTTG GACCATTAGT GGGTGGTTAT GCGCTAGACA GTCTCAGCAT GCACGCCTTA
TTACTATTTT CCGCGATAAG CAGTGCGGTT TTGCTGGGAA TATCCACTGT GATAGTCCGT
GACCTTGTGC AGCCTCAGCC CCCTGCAGAG CCCTCTGTGA TCAACGCCCG CTTATGGTCT
TGGCCCTTGG TAGGTTGGCT TGCGGCAGGT TGTGCTGTGC AGGCGGCCGC TTTTGCCTTG
GTGGTGGCGT TTGCCTTGTA TTACCAAGCT CAGTGGCCAG GCACTGAGCA CATTGCCAGT
CAAATTGGTG CACTTCACGC CACAGCTTGG TTGGCGACGT TTTTGTTTGC CGGTTTTTGG
GGTAAGCGTA ATCAATCTGG CAATCCAAGG TTTAACTTCA TGTTAGCCAG TGCAGGCTGT
GGCCTAGCAC TCCTGTGTAT ACCTTGGGTA AATCAATTAT GGCTATTTAT GCTAGCCCGT
TTTTGCCAAG GTGCTTGTTT TGCAGCTTTA CCACAAACCC TATTTTTACA GATCAGCAAA
ATTTGCCCGA TTAATCAACG TGGTGCGGCG CTAGGTTTAG CACGCAGTAG CCAAGTTGTG
GGGCAACTGC TTGGGCCGCT CTCAGTCGCG CTAGTGTATG ACCAGTTTGG TGCAAACTCA
GTGCTTTGGC CTGTGGTGTT GTGGTTTTTT GCTGGTAGCT GTTTCGTGAT CCTTCCAACC
CTATTTACTT CAACTTCATT TAAAGTGACA TCAATATGA
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| Protein sequence | MRNTFYTLLC IQFLVTFALM LLIPVMPLYL QQLNNNVPLS GFWSAAAIAA PAIGALLSAP
MIGKGCDRFE KKTMLMLTQC LFVISLFAMA LASSLISFLV ARLLLGFAGI SVVLTVYFCH
ASYQSEALQL AKQQRAIALA CLFGPLVGGY ALDSLSMHAL LLFSAISSAV LLGISTVIVR
DLVQPQPPAE PSVINARLWS WPLVGWLAAG CAVQAAAFAL VVAFALYYQA QWPGTEHIAS
QIGALHATAW LATFLFAGFW GKRNQSGNPR FNFMLASAGC GLALLCIPWV NQLWLFMLAR
FCQGACFAAL PQTLFLQISK ICPINQRGAA LGLARSSQVV GQLLGPLSVA LVYDQFGANS
VLWPVVLWFF AGSCFVILPT LFTSTSFKVT SI
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