| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_0550 |
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| Symbol | |
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| ID | 4016924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 623221 |
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| End bp | 623820 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637954535 |
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| Product | regulatory protein, TetR |
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| Protein accession | YP_561563 |
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| Protein GI | 91791912 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACCGT TTTATTTTAA ACAATTTGGA AATTTGGAAA TGGGCACAAA AGAACACATA
TTAGATATCG CCGAATCCTT GTTTAACGCG AATGGGTACA CCGCCGTTGG AGTTGACCTC
ATTCGTGATA CGGCTTGCGT ATCGAAAACC TCGATGTATC GTCATTTCGG TTCGAAAAAT
AAATTGATAC TCGCTGTTCT CGTTCGAAGA CATTTACGCT TCGAAGATAA GCTCGGCGGC
GCAATCTCGC CTGAAATGAC CATGGAAGAA AAATTGAATG CGCTTATTGA TTGGCACTTT
AAGTGGTTTA ATGCAGAGGA TTTTCATGGA TGTATGTTTA TGCATGCAAT GTCGGAATTT
AAAGAATCCG ATGACGCAAT TGCTGATTCT GCATCTATGC ACAAGAAGTG GCTTAAGGCA
CTGATCAAGC AGATTATTTC GAATACCCCA AATGACGATG AACAACTAGC GGAGTCAAAA
GCCGAATCCA TCATGGCGTT TATTGAAGGC ATGATTGTAC GAGCAGAATT CGATGATATC
ACTTCGTTTA GACCAATATA TCGATTTGCG ATTCAAACAT TATCTAAAAC AAATTTCTAA
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| Protein sequence | MQPFYFKQFG NLEMGTKEHI LDIAESLFNA NGYTAVGVDL IRDTACVSKT SMYRHFGSKN
KLILAVLVRR HLRFEDKLGG AISPEMTMEE KLNALIDWHF KWFNAEDFHG CMFMHAMSEF
KESDDAIADS ASMHKKWLKA LIKQIISNTP NDDEQLAESK AESIMAFIEG MIVRAEFDDI
TSFRPIYRFA IQTLSKTNF
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